ID JX128101; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC JX128101; XX DT 20-AUG-2012 (Rel. 113, Created) DT 20-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Papaya leaf curl China virus isolate GX88 segment DNA-A, complete sequence. XX KW . XX OS Papaya leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Tang Y.F., He Z.F.; RT "Molecular characterization of tomato yellow leaf curl begomoviruses in RT China"; RL Unpublished. XX RN [2] RP 1-2738 RA Tang Y.F., He Z.F.; RT ; RL Submitted (02-JUN-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; 38e7ada4245aafb3f6817c431e0c4f86. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Papaya leaf curl China virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="GX88" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Z.F.He" FT /collection_date="07-Jan-2012" FT /db_xref="taxon:229634" FT gene 131..481 FT /gene="AV2" FT CDS 131..481 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:J7H746" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:J7H746" FT /protein_id="AFP89724.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDLPDVQKP" FT gene 291..1064 FT /gene="AV1" FT CDS 291..1064 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:J7H1G9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:J7H1G9" FT /protein_id="AFP89723.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW FT VNRPMYRKPRIYLMYKSPDVPRGCEGPCKVQSYEQRHDVSHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGNPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1061..1465) FT /gene="AC3" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:J7H4N1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J7H4N1" FT /protein_id="AFP89727.1" FT /translation="MDFRTGELLTATQCESGVYIWTIKNPLYFKITKHHERPFNTNHDI FT ITIQIQFNHNXRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLYNLGVISINN FT VIRACDHVLWDVLEKTEYVTHSNIIKFNLY" FT gene complement(1206..1613) FT /gene="AC2" FT CDS complement(1206..1613) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:J7H8G2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7H8G2" FT /protein_id="AFP89726.1" FT /translation="MRNSSPSTAHCTQVPIKVQHKIAKKRPVRRRRVDLTCGCSYYFGL FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQ FT XEESVGNTPVFSNLPDLDSLTSSDLAFLKSI" FT gene complement(1513..2601) FT /gene="AC1" FT CDS complement(1513..2601) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:J7H1K2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7H1K2" FT /protein_id="AFP89725.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILKEKAPKDYVLQFH FT NLNNNLDRIFSPPQEVFVCPFLSSSFDQVPEELEDWVSENVSGAAARAWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPL FT YSGTNQSATQNSQEEARPETES" FT gene complement(2151..2444) FT /gene="AC4" FT CDS complement(2151..2444) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:J7H757" FT /protein_id="AFP89728.1" FT /translation="MGLLTCMCSSNSKENSSVKIKDSSISHPQAGQHISIRTFRQLKAQ FT QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2738 BP; 727 A; 547 C; 588 G; 875 T; 1 other; accggatggc cgcgattttt ttatatggtc cccaccacta agaaatgtcc tccacttaga 60 acgccccctc aaagcctatt taattcaaat ccgttataaa tacttggtcc ccaagtagtc 120 actttaaaat atgtgggatc ctttactgaa tgagtttcct gaaaccgtac atggtttcag 180 gtgtatgtta gccatcaagt atttgcagct ggtagaaaat acatactccc ctgatacttt 240 agggtacgat ttaattcgtg atttaatttc ggttattcgt gctagagact atgtcgaagc 300 gtcccgccga tatagtcatt tccactcccg catccaaggt gcgtcgccgg ctgaacttcg 360 acagcccgta tgccagccgt gctgctgccc ccactgtcct cgtcacaaac aaaaggaggt 420 catgggtgaa tcggcccatg taccgaaagc ccaggatcta cctgatgtac aaaagccctg 480 atgttcctcg tggttgtgaa ggtccatgta aggttcagtc ttatgaacag cgtcatgatg 540 tatcgcatgt aggtaaggtc atttgtgtgt cggatgttac tcgtggtaac gggttgactc 600 atcgagttgg aaagaggttt tgtgttaagt ctgtctatgt tttgggcaag atatggatgg 660 atgagaacat taagaccaag aatcatacta atactgtgat gttttttcta gttcgtgata 720 ggagaccata tgggaatcca caggattttg gtcaggtgtt taatatgtac gataatgagc 780 ctagcactgc tactgttaag aacgacaata gagatcgctt tcaagttcta cgccgttttc 840 aggcgactgt tactggtggt cagtatgcta gtaaggagca ggcaatagtc aggaaattca 900 tgaaggtgaa caaccatgtt acttataatc atcaagaagc tgcgaagtat gacaatcaca 960 cagagaatgc tcttttgttg tatatggcat gtactcatgc tagtaatcca gtgtatgcta 1020 ctttgaagat cagaatctat ttctatgatt ctgttcagaa ttaataaaga ttgaatttta 1080 ttatatttga atgtgttaca tattctgttt tttccaatac atcccataat acatgatcac 1140 atgctctaat tacattgtta atactaatta cacccaaatt atataaatat ttcatacatt 1200 gaaccctaaa tactcttaag aaacgccaag tctgaggacg taagcgagtc cagatctgga 1260 agattagaaa acactggtgt attcccaacg ctttcctcas gttgtggttg aattgtattt 1320 ggatcgttat gatgtcgtgg ttggtgttga atggtctctc gtggtgcttg gttatcttga 1380 aatatagggg atttttgatc gtccagatat acacgccact ctcgcattga gttgcagtga 1440 gtaattcccc tgtgcgaaaa tccatgattt gcacaatcta atccgaagta gtatgagcac 1500 ccgcacgtta gatcaactct ccgtctccgg acgggcctct tcttggctat tttgtgttgc 1560 actttgattg gtacctgagt acaatgggct gttgagggtg atgaattccg cattctttaa 1620 tgcccaatct tttaaagctg aatttttatc ctcattcaag tactctttat atgatgatgt 1680 tgggcctgga ttgcaaagga agatagttgg aattccacct ttaatttgaa ttggtttccc 1740 gtacttagtg ttgctttgcc agtccctttg ggcccccatg aattctttaa agtgctttag 1800 atagtggggg tctacgtcat caatgacgtt ataccaagcc tcattactgt atactcttgg 1860 gcttagatca agatgtccac acaaataatt gtgtggtccc agtgatctgg cccacattgt 1920 tttacccgta cgactatcac cttctatcac aatgcttttc ggtctccatg cccgcgcagc 1980 ggcaccactc acattctcgg aaacccagtc ttcaagttct tctggaactt gatcgaaaga 2040 agaagacaaa aaaggacaaa caaacacctc ttgtggagga ctaaaaatcc tatctaaatt 2100 attatttaaa ttatgaaact gtaaaacata atctttagga gctttctcct ttagtatatt 2160 gagggccgaa gctttggacc ctgaattgat tgcctcggca tatgcgtcgt tggcagattg 2220 gcaacctcct ctagccgatc ttccatcgat ctggaaaact ccatgatcaa gcacgtctcc 2280 gtctttgtcc atgtaggact tgacatctgt tgagctttta gctgcctgaa tgttcggatg 2340 gaaatgtgct gacctgcttg gggatgtgag atcgaagaat ctttgatttt tacactggaa 2400 ttttccttcg aattggatga gcacatgcag gtgaggagac ccatcttcgt gtaattctct 2460 gcagatgcga ataaatagtt tatttactgg ggtttctagg gttttaattt gtgaaagtgc 2520 ttcttcttta gtgagagagc agtgtggata tgtgaggaaa taatttttgg cattaattct 2580 gaatttattt gggggagcca ttgactggtc aatcggtgtc tctcaaactt ggctatgcaa 2640 ttggtgtctg gtgtcttatt tatatgtaga caccaaatgg cattatcgta attcccataa 2700 gaatttcaaa atccaaaagc ggccatccgt ataatatt 2738 //