Dbfetch
ID JX128094; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC JX128094; XX DT 20-AUG-2012 (Rel. 113, Created) DT 20-AUG-2012 (Rel. 113, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate YG1 segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Tang Y.F., He Z.F.; RT "Molecular characterization of tomato yellow leaf curl begomoviruses in RT China"; RL Unpublished. XX RN [2] RP 1-2740 RA Tang Y.F., He Z.F.; RT ; RL Submitted (02-JUN-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; 9d2e3a698652552a33ed5170952212c1. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="YG1" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Z.F.He" FT /collection_date="26-Nov-2011" FT /db_xref="taxon:196093" FT gene 132..473 FT /gene="AV2" FT CDS 132..473 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5JHC0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5JHC0" FT /protein_id="AFP89682.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPVWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q09M61" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09M61" FT /protein_id="AFP89681.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:J7H1G8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:J7H1G8" FT /protein_id="AFP89685.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLYNLGVISLNN FT VCKAMRHVLYNVIEGTIDAQFSHIIKFKIY" FT gene complement(1207..1614) FT /gene="AC2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:J7H709" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:J7H709" FT /protein_id="AFP89684.1" FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLHCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT gene complement(1514..2602) FT /gene="AC1" FT CDS complement(1514..2602) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:J7H1D0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:J7H1D0" FT /protein_id="AFP89683.1" FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPLEVYISPFNFSSFDQVPRELVKWVAENVRDSAARPWRPMSIVVEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNIIDDVDPHYLKHFKEFMGAQREW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL FT YSRANQGPTQNSEEETNSQAEG" FT gene complement(2152..2445) FT /gene="AC4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q072R9" FT /protein_id="AFP89686.1" FT /translation="MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQ FT QMSKPIWRKTETCLIMEFSRSMEDQLEEVANLQTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2740 BP; 722 A; 536 C; 609 G; 873 T; 0 other; accggatggc cgcgattttt ttaagtgggt cctacgcact aatgctggtc ggccaataga 60 aacgctccct caaagcttat taacaaaaat acccgttata aatacttggt ggctaagtta 120 cagtcggtaa aatgtgggat ccacttttaa atgattttcc ggagtctgta catggtctac 180 ggtgtatgct tgccattaag tatctacatc ttgtagaaaa tacatattcc ccggatactt 240 tgggttacga tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 300 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg tctgaacttc 360 gccagcccgt atggcaaccg tgtagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcctc gtggttgtga aggcccatgt aaggtacagt catttgaaca gcgtcatgat 540 atatcccatg tgggcaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagcactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgtcgattc 840 caggctacgg tgactggcgg tcaatatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata cgataaccat 960 acagagaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaactgggc atcgatcgtg ccctctatta cattgtatag tacatgtctc 1140 attgctttac atacattgtt taaactaata acgcctaaat tgtataaata cttcatacat 1200 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gttccgtaga aatggtctct ggttgtgttg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca 1500 cccacaatga agatcaaccc tccgcctgcg aattggtctc ttcttcgcta ttttgtgttg 1560 gaccttgatt ggcacgtgag tagagtggct cggtgagggt gatgaattcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cattcccttt gggcccccat gaattcttta aagtgcttta 1800 ggtagtgggg atcgacgtca tcaatgatgt tataccatgc ctcattgctg tacactcttg 1860 ggcttaggtc aagatgacca cataagtaat tgtgtgggcc tagagacctg gcccaaagtg 1920 tcttcccagt acgactctca ccctctacaa caatactcat gggtctccat ggccgcgcag 1980 cggaatccct cacgttctcg gcaacccatt ttacaagttc tcttggaact tgatcaaatg 2040 aagaaaaatt aaaaggagaa atatagacct ccaatggagg tgtaaaaatt ctatctaaat 2100 tactatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc cttaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg tttgcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaat tccatgatca agcacgtctc 2280 cgtctttctc catataggtt ttgacatctg ttgagctctt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa tctgttattt ttacattgga 2400 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg tgaagctctc 2460 tgcaaaccct aatgaatagt ttatttgttg gggtttgtag agcttgtatt tgggaaagtg 2520 cctcttcttt ggttaaggag cagtgtggat acgtgaggaa gtaattcttt gcatttatcc 2580 tgaatttatt aagtggaggc atgttgactt agtcaattgg tgtctctcaa acttctctat 2640 gtatcggtgt attggggtct tatttatact gggacactaa atggcattta tgtaattaca 2700 ttaatttacc aaggggtaaa gcggccatcc gtttaatatt 2740 //