ID   JX070669; SV 1; linear; genomic RNA; STD; VRL; 867 BP.
XX
AC   JX070669;
XX
DT   05-AUG-2012 (Rel. 113, Created)
DT   05-AUG-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Cowpea mild mottle virus capsid protein gene, complete cds.
XX
KW   .
XX
OS   Cowpea mild mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-867
RA   Cheng Y.H., Liao J.Y., Chen C.C., Den T.C., Chai J.F., Chang C.A.;
RT   "Identification and molecular characterization of Cowpea mild mottle virus
RT   asparagus bean isolate in Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Cheng Y.H., Liao J.Y., Chen C.C., Den T.C., Chai J.F., Chang C.A.;
RT   ;
RL   Submitted (16-MAY-2012) to the INSDC.
RL   Plant Pathology Division, Agricultural Research Institute, No. 189,
RL   Zhongzheng Rd., Wufong, Taichung, Taiwan 41301, Taiwan
XX
DR   MD5; 22a4a1cfc3d39a939b8582db3196e4a5.
DR   EuropePMC; PMC3528291; 23242372.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..867
FT                   /organism="Cowpea mild mottle virus"
FT                   /host="Vigna unguiculata"
FT                   /lab_host="Chenopodium quinoa"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /isolation_source="asparagus bean"
FT                   /collection_date="May-2009"
FT                   /identified_by="Y. H. Cheng"
FT                   /db_xref="taxon:67761"
FT   CDS             1..867
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I7DGU6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:I7DGU6"
FT                   /protein_id="AFO84257.1"
FT                   /translation="MESVFDLNKLLDSEMADKTKTGDPKAADGTALPDIDADLQKRLDD
FT                   LRAFLRKTQSASEITNPGFELGRPALKESTFNSDKHTHIYGKWSIDQLSRIVPKKISNN
FT                   MATAEEMAKVQITLEGLGVPTEHVAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILS
FT                   DSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKYSDRFAAFDCFEYV
FT                   ENPAAIQPAEGLIRKPTPSEKIAHNTYKRLALDKSNRNELYANLNTEVTGGTLGPEISR
FT                   NFNHAKK"
XX
SQ   Sequence 867 BP; 256 A; 162 C; 204 G; 245 T; 0 other;
     atggagtcag tgtttgattt aaataaattg ttggatagtg agatggctga taaaacaaaa        60
     actggcgatc caaaagctgc cgatggaaca gctcttccag acattgatgc tgatttgcaa       120
     aagaggttgg atgatttgag ggctttctta aggaaaactc agagtgcatc tgagataacc       180
     aaccctggtt ttgaacttgg tagacctgca ttgaaagagt ccactttcaa ctctgacaag       240
     cacactcata tttatggaaa gtggtcaatt gatcagctca gccggatagt tcccaagaaa       300
     atatctaata atatggcaac agctgaggaa atggctaaag ttcagattac tctagagggt       360
     ttgggagtgc caacggagca tgtggctgag gttctcttac aagttgcaat ctattgcaag       420
     gatgtcagtt cctcaagctt tatggattct agcggcacct ttgattggaa aggtggctcc       480
     attttgtctg attcagtgat tgccgctttg aggaaagacg ataataccct tcgtagggta       540
     tgtcgattgt atgccccaat tacatggaat ttcatgttga ctcacaaagc tccaccttct       600
     gattgggctg ccatgggttt caaatactct gatcgatttg ctgcatttga ttgttttgag       660
     tatgtggaga accctgctgc tattcaacct gctgaggggt tgataaggaa gcctacaccc       720
     agtgagaaaa ttgctcacaa cacatacaaa aggttagctt tggataaatc aaacagaaac       780
     gagctgtatg ctaacttgaa tactgaagtg actggaggta ctctagggcc tgaaatatct       840
     cgcaacttca atcacgctaa gaagtaa                                           867
//