Dbfetch

Dbfetch

ID   JX067842; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
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AC   JX067842;
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DT   08-OCT-2012 (Rel. 114, Created)
DT   08-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Barley yellow dwarf virus-PAV isolate CO374_79 coat protein (ORF3) gene,
DE   complete cds.
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KW   .
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OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
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RN   [1]
RP   1-603
RA   Mar T.B., Lau D., Schons J., Lau E.Y., Nhani A.;
RT   "Cloning and Phylogenetic Analysis of Coat Protein of Barley yellow dwarf
RT   virus Isolates from Brazil";
RL   Unpublished.
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RN   [2]
RP   1-603
RA   Mar T.B., Lau D., Schons J., Lau E.Y., Nhani A.;
RT   ;
RL   Submitted (11-MAY-2012) to the INSDC.
RL   CNPT, EMBRAPA, BR285 KM 294, Passo Fundo, RS 99001970, Brazil
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DR   MD5; 5d926ba17c0f35a9988ce4041196f56c.
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FH   Key             Location/Qualifiers
FH
FT   source          1..603
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="barley"
FT                   /isolate="CO374_79"
FT                   /serotype="PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="Sep-2008"
FT                   /db_xref="taxon:2169986"
FT   gene            1..603
FT                   /gene="ORF3"
FT   CDS             1..603
FT                   /codon_start=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0I781"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:K0I781"
FT                   /protein_id="AFU48523.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRRRRTIRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISKTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 603 BP; 177 A; 159 C; 147 G; 120 T; 0 other;
     atgaattcag taggccgtag aggacctaga cgcgcaaatc aaaatggccc aagaaggagg        60
     cgccgtagaa caattcggcc agtggttgtg gtccaaccca atcgagcagg acccagacga       120
     cgaaatggtc gacgcaaggg aagaggaggg gcaaatcctg tatttagacc aacaggcggg       180
     actgaggtat tcgtattctc agttgacaac cttaaagcca actcctccgg ggcaatcaaa       240
     ttcggcccca gtctatcgca atgcccagcg ctttcagacg gaatactcaa gtcctaccat       300
     cgttacaaga tcacaagtat ccgagttgag tttaagtcac acgcgtccgc cactacggcc       360
     ggcgctatct ttattgaact cgacaccgcg tgcaagcaat cagccctggg tagctacatt       420
     aattccttca ccatcagcaa gaccgcctcc aaggtcttcc gggcagaggc aattaacggg       480
     aaggaattcc aggaatcaac gatagaccaa ttttggatgc tctacaaggc taatggaacc       540
     accactgaca ctgcaggaca attcatcatc acgatgagtg tcagtttgat gacggccaaa       600
     tag                                                                     603
//