ID   JX047230; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
XX
AC   JX047230;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   12-DEC-2013 (Rel. 119, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate SDJNiR30 P8 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1936
RX   DOI; 10.1007/s00705-013-1766-8.
RX   PUBMED; 23807744.
RA   Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T.,
RA   Liu B.S.;
RT   "Genetic structure of rice black-streaked dwarf virus populations in
RT   China";
RL   Arch. Virol. 158(12):2505-2515(2013).
XX
RN   [2]
RP   1-1936
RA   Yin X., Li X.D.;
RT   ;
RL   Submitted (10-MAY-2012) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL   Street, Tai'an, Shandong 271018, China
XX
DR   MD5; 2e6e8d9dd833d73da7cf3c092e57c2b0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="8"
FT                   /host="Oryza sativa"
FT                   /isolate="SDJNiR30"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:10990"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8"
FT                   /note="minor core protein"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:R4IW84"
FT                   /protein_id="AGE44077.1"
FT                   /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTANPT
FT                   SNPILVSPSITEYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGFYPDLFNNPI
FT                   KYLGFLIFMPDVSMHLDSPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT                   LAERFETYYFDPRCERTSIGFLKRTAIVRFEFLSYKYNNDLTLSEREKLPVWTSHLIAR
FT                   MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERDFLSVKTDIQA
FT                   IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD
FT                   LLRVFKEGQDVQIIGNKGVGKSEIGVMLAERYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT                   NFDFEINEELLTGEIYFQAMSDFIKAKQTEGVSLQTIFEYVMEGILLPNTIESGEANEE
FT                   VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT                   YITLYSSYNSAVLNVVPRNGQVECSPSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT                   LTKGLNVLKASSIIV"
XX
SQ   Sequence 1936 BP; 605 A; 332 C; 332 G; 667 T; 0 other;
     aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat ttctttaaga        60
     cttttattct tcaatttatg gaacaaaaaa cgaccaaacg acccaattaa ccaccgaaaa       120
     acgaagaaaa agctaaaacc tcaaacagca aatcctacat caaaccccat tttggtatcc       180
     ccttcaatta ctgagtatgc tgaacagata tcagacgaat ttgctaaggc tcgaaaaccg       240
     attttagtcc cgactcaaat attttccgct ttcactagac ttgaaacgat tttcaacaga       300
     acaggctttt accctgattt gttcaataat ccaatcaaat acctcggatt tttaatcttc       360
     atgcccgatg tttcaatgca tttagattct cccactgttg atcattcata ttataatttg       420
     aagagaaatc ataagatgag ttttgatgaa cttcaatcaa atttaacttc ccgaatgtta       480
     actggccaaa ttgtgaagac tgagactaat gatcttgcgg aacgttttga aacttattac       540
     tttgacccta gatgtgaaag aacaagcatt ggatttttga aaagaaccgc gattgtaaga       600
     tttgaattct tatcttataa atacaacaat gatttaacac tgtcagaacg tgaaaaatta       660
     cctgtttgga cttctcattt aatagctcgt atgaacgttg aaaatgtttc tttaccattg       720
     gaaattagtt gtagtgcaat caatcccacc caacattttg ctgttatagt tcttaaaaat       780
     gctaaaacca atgtgacaag aggcagattc tggaccgtgt tggacgacga acgtgacttt       840
     ttatctgtta aaaccgatat tcaagcgatt gaatttgaac gtaattctgt aaccactgct       900
     ggcaatttaa gacatgtttt aaacaattgt ttaacattag gcgaaccctt cgccttcgac       960
     ccacttgatt attcttttaa acttaactta cttgaaacag ggttatctcc attagatgac      1020
     gtagtgacca ttagattgaa agatttgttg cgtgtgttca aagaaggaca ggatgttcaa      1080
     attattggta ataaaggagt aggtaagtct gaaattggcg taatgttagc agaacgatat      1140
     ccccatcttt tagttgttga tagtgatgat tatggcaggt ttttggtaat gttgcttaat      1200
     ttagttcctt cattgtttaa aaattttgat tttgaaatta acgaagaact tttaacagga      1260
     gaaatttatt ttcaagctat gtctgatttt attaaggcta aacaaactga aggtgtttca      1320
     cttcaaacga tttttgagta tgtgatggaa ggaatccttc ttccaaacac tattgagagt      1380
     ggagaagcta atgaggaagt tattttagac atttttaatc gtgtttttca tagcatccaa      1440
     ggttctaaat ttattggata tcgtaagttc atgattgaat atacgcgtct gatgtacact      1500
     aattttaaca agagtcaaac ttgtcatttc gttcactctt attgtgaatt atcgttcgtt      1560
     cctcattctt tggcttatat tactttatac agtagttaca actcagctgt gttaaatgtt      1620
     gttcctagaa acggacaagt agaatgcagt ccttcaaaga tgatggccaa tacgctactt      1680
     catcattttt acgaaagata tacctctaat atgaatccaa ccccagtatt tttgttttct      1740
     tatttctttg gtttaaccaa aggtttaaat gttctaaaag cttcatctat tattgtgtaa      1800
     cattactatg cttttgtgaa gaatatcatg tccttttagg gttcgattcg tataaaggtg      1860
     tttcagtcca atatcttgat ggcagactag gtcaatgttc gattctagtg aagtgtgcga      1920
     aaattcagct attgtc                                                      1936
//