ID   JX047197; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
XX
AC   JX047197;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   12-DEC-2013 (Rel. 119, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate SDDZ1 P8 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1936
RX   DOI; 10.1007/s00705-013-1766-8.
RX   PUBMED; 23807744.
RA   Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T.,
RA   Liu B.S.;
RT   "Genetic structure of rice black-streaked dwarf virus populations in
RT   China";
RL   Arch. Virol. 158(12):2505-2515(2013).
XX
RN   [2]
RP   1-1936
RA   Yin X., Li X.D.;
RT   ;
RL   Submitted (10-MAY-2012) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL   Street, Tai'an, Shandong 271018, China
XX
DR   MD5; b1d47eba37f795346c860f25356f06d4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="8"
FT                   /host="Zea mays"
FT                   /isolate="SDDZ1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:10990"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8"
FT                   /note="minor core protein"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:R4IX32"
FT                   /protein_id="AGE44044.1"
FT                   /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTANPT
FT                   SNPILVSPSITEYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGSYPDLFNNPI
FT                   KYLGFLIFMPDVSMHLDSPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT                   LAERFETYYFDPRCERTSIGFLKRTAIVRFEFLSYKYNNDLTLSEREKLPVWASHLIAR
FT                   MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERDFLSVKTDIQA
FT                   IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD
FT                   LLRVFKEGQDVQIIGNKGVGKSEIGAMLAARYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT                   NYDFEINEELLNEEIYFQAMSDFIKAKQTEDVSLQTIFEYVMEGIILPNTIESGEANEE
FT                   VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT                   YITLYSSYNSAVLNVVPRNGQVECSSSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT                   LTKGLNVLKASSIIV"
XX
SQ   Sequence 1936 BP; 607 A; 340 C; 331 G; 658 T; 0 other;
     aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat ttctttaaga        60
     cttttattct tcaacttatg gaacaaaaaa cgaccaaacg acccaatcaa ccaccgaaaa       120
     acgaagaaaa agctaaaacc tcaaacagca aatcctacat caaaccccat tttggtatcc       180
     ccttcaatta ctgagtatgc tgaacaaata tcagacgaat ttgctaaggc tcgaaaacca       240
     attttagtcc cgactcaaat attttccgct ttcactagac ttgaaacgat tttcaacaga       300
     acaggctctt accctgattt gttcaataat ccaatcaaat acctcggatt tttaattttc       360
     atgcctgatg tttcaatgca tttagattct cccactgttg atcattcata ttataatttg       420
     aagagaaacc ataaaatgag ttttgatgaa cttcaatcaa atttaacttc ccgaatgtta       480
     actggccaaa ttgtgaaaac tgagaccaat gatcttgcgg aacgttttga aacttattac       540
     tttgacccta gatgtgaaag aacaagtatc ggatttttga aaagaaccgc gattgttaga       600
     tttgaattct tatcttataa atacaacaat gatttaacgc tgtcagaacg tgaaaaatta       660
     cctgtttggg cttctcattt aatagctcgt atgaacgtgg agaatgtttc tttaccattg       720
     gaaattagtt gtagtgcaat caatcccacc caacatttcg ctgttatagt tcttaaaaat       780
     gctaaaacca atgtgacaag gggcagattc tggaccgtgt tggacgatga acgtgacttt       840
     ttatctgtta aaaccgatat tcaagcgatt gaatttgaac gtaattccgt aaccactgct       900
     ggcaatttaa gacatgtttt aaacaattgt ttaacattag gcgaaccttt cgccttcgac       960
     ccacttgact attcttttaa acttaactta cttgaaacag ggctatctcc attagatgac      1020
     gttgtgacca ttagattgaa agatttgcta cgtgtgttca aagaagggca ggatgttcaa      1080
     attattggta ataaaggagt aggtaagtct gaaattggcg caatgttagc agcacgatat      1140
     cctcatcttt tagttgttga tagtgatgat tatggcaggt ttttggtaat gttacttaat      1200
     ttagttccct cattgtttaa aaattatgat tttgaaatta acgaagaact tttaaacgaa      1260
     gaaatttatt ttcaagccat gtctgatttt attaaagcca aacaaactga agatgtttcg      1320
     cttcaaacga tttttgagta tgtaatggaa ggaataattc ttcccaacac tattgagagt      1380
     ggagaagcta atgaggaagt tattttagac atttttaatc gtgtttttca tagcatccaa      1440
     ggttctaaat ttattggata tcgtaagttc atgattgaat atacgcgtct aatgtacact      1500
     aattttaaca agagtcaaac ttgtcatttc gtccactcgt attgtgaatt gtctttcgtt      1560
     cctcattcct tggcgtatat tactttatac agcagttaca attcagctgt gttaaatgtt      1620
     gttcctagaa acggacaagt agaatgcagt tcttcaaaga tgatggccaa tacgctactt      1680
     catcattttt atgaaagata tacttctaat atgaatccaa ccccagtatt tttgttttct      1740
     tatttctttg gtttaaccaa aggtttaaac gttctgaaag cttcatctat tattgtgtaa      1800
     cattattatg tttttgtgaa gaatatcatg tccttttagg gttcgactcg tataaaggtg      1860
     tttcagtcca atatcttgat ggcagactag gtcaatgttc gattctagtg aagtgtgcga      1920
     aaattcagct attgtc                                                      1936
//