ID   JX047179; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
XX
AC   JX047179;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   12-DEC-2013 (Rel. 119, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate JSHA64 P8 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1936
RX   DOI; 10.1007/s00705-013-1766-8.
RX   PUBMED; 23807744.
RA   Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T.,
RA   Liu B.S.;
RT   "Genetic structure of rice black-streaked dwarf virus populations in
RT   China";
RL   Arch. Virol. 158(12):2505-2515(2013).
XX
RN   [2]
RP   1-1936
RA   Yin X., Li X.D.;
RT   ;
RL   Submitted (10-MAY-2012) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL   Street, Tai'an, Shandong 271018, China
XX
DR   MD5; d23b57eed649f99ff01b180f5771aeb3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="8"
FT                   /host="Zea mays"
FT                   /isolate="JSHA64"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:10990"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8"
FT                   /note="minor core protein"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:R4IWD7"
FT                   /protein_id="AGE44026.1"
FT                   /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKEKLKPQTANPT
FT                   SNPILVSPSITEYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGSYPDLFSNPI
FT                   KYLGFLIFMPDVSMHLDSPTVEHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT                   LAERFETYYFDPRCERTSIGFLKRTAIVRFEFLSYKYNNDLTLSEREKLPVWASHLIAR
FT                   MNVENVSLPLEISCSAINPTQHFAVIVLKNAKTNVTRGRFWTVLDDERDFLSVKTDIQA
FT                   IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD
FT                   LLRVFKEGQDVQIIGNKGVGKSEIGAMLAERYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT                   NYDFEINEELLTEEIYFQAMSDFIKAKQTEDVSLQTIFEYVMEGIILPNTIESGEANEE
FT                   VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT                   YITLYSSYNSAVLNVVPRNGQVECSSSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT                   LTKGLNVMKASSIIV"
XX
SQ   Sequence 1936 BP; 607 A; 340 C; 332 G; 657 T; 0 other;
     aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat ttctttaaga        60
     cttttattct tcaacctatg gaacaaaaaa cgaccaaacg acccaatcaa ccaccgaaaa       120
     acgaaggaaa agctaaaacc tcaaacagca aatcctacat caaaccccat tttggtatcc       180
     ccttcaatta ctgagtatgc tgaacaaata tcagacgaat ttgctaaggc tcgaaaacca       240
     attttagtcc cgactcaaat attttccgct ttcactagac ttgaaacgat tttcaacaga       300
     acaggctctt accctgattt gttcagtaat ccaatcaaat acctcggatt tttaattttc       360
     atgcctgatg tttcaatgca tttagattct cccactgttg aacattcata ttataatttg       420
     aagagaaacc ataaaatgag ttttgatgaa cttcaatcaa atttaacttc ccgaatgtta       480
     actggccaaa ttgtgaaaac tgagaccaat gatcttgcgg aacgttttga aacttattac       540
     tttgacccta gatgtgaaag aacaagtatc ggatttttga aaagaaccgc gattgttaga       600
     tttgaattct tatcttataa atacaacaac gatttaacgc tgtcagaacg tgaaaaatta       660
     cctgtttggg cttctcattt aatagctcgt atgaacgtgg aaaatgtttc tttaccattg       720
     gaaattagtt gtagtgcaat caatcccacc caacatttcg ctgttatagt tcttaaaaat       780
     gctaaaacca atgtgacaag gggcagattc tggaccgtgt tggacgatga acgtgacttt       840
     ttatctgtta aaaccgatat tcaagcgatt gaatttgaac gtaattccgt aaccactgct       900
     ggcaatttaa gacatgtttt aaacaattgt ttaacattag gcgaaccttt cgccttcgac       960
     ccacttgact attcttttaa acttaactta cttgaaacag ggctatctcc attagatgac      1020
     gttgtgacca ttagattgaa agatttgtta cgtgtgttta aagaaggtca ggatgttcaa      1080
     attattggta ataaaggagt aggtaagtct gaaattggcg caatgttagc agaacgatat      1140
     cctcatcttt tagttgttga tagtgatgat tatggcaggt ttttggtaat gttacttaat      1200
     ttagttccct cattgtttaa aaattatgat tttgaaatta acgaagaact tttaaccgaa      1260
     gaaatttatt ttcaagccat gtctgatttt attaaagcca aacaaactga agatgtttcg      1320
     cttcaaacga tttttgagta tgtaatggaa ggaataattc ttcccaacac cattgagagt      1380
     ggagaagcta atgaggaagt tattttagac atttttaatc gtgtttttca tagcatccaa      1440
     ggttctaaat ttattggata tcgtaagttc atgattgaat atacgcgtct aatgtacact      1500
     aattttaaca agagtcaaac ttgtcatttc gtccactcgt attgtgaatt gtctttcgtt      1560
     cctcattcat tggcttatat tactttatac agtagttaca actcagctgt gttaaatgtt      1620
     gttcctagaa acggacaagt agaatgcagt tcttcaaaga tgatggccaa tacgctactt      1680
     catcattttt acgaaagata tacttctaat atgaatccaa ccccagtatt tttgttttct      1740
     tatttctttg gtttaaccaa aggtttaaac gttatgaaag cttcatctat tattgtgtaa      1800
     cattattatg cttttgtgaa gaatatcatg tccttttagg gttcgactcg tataaaggtg      1860
     tttcagtccg atatcttgat ggcagactag gtcgatgttt gattctagtg aagtgtgcga      1920
     aaattcagct attgtc                                                      1936
//