ID   JX047166; SV 1; linear; genomic RNA; STD; VRL; 1936 BP.
XX
AC   JX047166;
XX
DT   31-MAY-2013 (Rel. 116, Created)
DT   12-DEC-2013 (Rel. 119, Last updated, Version 3)
XX
DE   Rice black streaked dwarf virus isolate JSSQ8 P8 gene, complete cds.
XX
KW   .
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1936
RX   DOI; 10.1007/s00705-013-1766-8.
RX   PUBMED; 23807744.
RA   Yin X., Zheng F.Q., Tang W., Zhu Q.Q., Li X.D., Zhang G.M., Liu H.T.,
RA   Liu B.S.;
RT   "Genetic structure of rice black-streaked dwarf virus populations in
RT   China";
RL   Arch. Virol. 158(12):2505-2515(2013).
XX
RN   [2]
RP   1-1936
RA   Yin X., Li X.D.;
RT   ;
RL   Submitted (10-MAY-2012) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, 61 Daizong
RL   Street, Tai'an, Shandong 271018, China
XX
DR   MD5; 98f7112c8936370bd4b2bdfd4de61f02.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Rice black streaked dwarf virus"
FT                   /segment="8"
FT                   /host="Zea mays"
FT                   /isolate="JSSQ8"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:10990"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8"
FT                   /note="minor core protein"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:R4IWM4"
FT                   /protein_id="AGE44013.1"
FT                   /translation="MTGTHDDRISLRLLFFNLWNKKRPNDPINHRKTKKKLKPQTTNPP
FT                   SNPILVSPSITEYAEQISDEFAKARKPILVPTQIFSAFTRLETIFNRTGSYPDLFSNPI
FT                   KYLGFLIFMPDVSMHLDSPTVDHSYYNLKRNHKMSFDELQSNLTSRMLTGQIVKTETND
FT                   LAERFETYYFDPRCERTSIGFLKRSAIVRFEFLSYKYNNDLTMSEREKLPVWASHLIAR
FT                   MNVDNVSLPLEISCSAINPTQHFAIMVLKNAKTNVTRGRFWTVLDDERDFLSIKTDIQA
FT                   IEFERNSVTTAGNLRHVLNNCLTLGEPFAFDPLDYSFKLNLLETGLSPLDDVVTIRLKD
FT                   LLRVFKEGQDVQIIGNKGVGKSEIGAMLAARYPHLLVVDSDDYGRFLVMLLNLVPSLFK
FT                   NYDFEINEELLTEEIYFQAMSDFIKAKQTEDVSLQTIFEYVMEGIILPNTIESGEANEE
FT                   VILDIFNRVFHSIQGSKFIGYRKFMIEYTRLMYTNFNKSQTCHFVHSYCELSFVPHSLA
FT                   YITLYSSYNSAVLNVVPRNGQVECSSSKMMANTLLHHFYERYTSNMNPTPVFLFSYFFG
FT                   LTKGLNVLKASSIIV"
XX
SQ   Sequence 1936 BP; 607 A; 344 C; 332 G; 653 T; 0 other;
     aagttttttt cgcactgtct aaagatgact ggcacccatg acgaccggat ttctttaaga        60
     cttttattct tcaacttatg gaacaaaaaa cgaccaaacg acccaatcaa ccaccgaaaa       120
     acgaagaaaa agctaaagcc tcaaacaaca aatcctccat cgaaccccat tttagtatcc       180
     ccttcaatta ccgagtatgc tgaacaaata tcagacgaat ttgctaaggc ccgaaaacca       240
     attttagtcc cgactcaaat attttctgct ttcactagac ttgaaacgat tttcaacaga       300
     acaggctctt accctgattt gttcagtaat ccaatcaaat atctcggatt tttaatcttc       360
     atgcccgatg tttcaatgca tttagattct cccactgttg atcattcata ttataatttg       420
     aagagaaatc ataaaatgag ttttgatgag cttcaatcaa atttaacctc acgaatgtta       480
     actggccaaa ttgtgaaaac tgagactaat gatcttgcgg aacgttttga aacttactac       540
     tttgatccta gatgtgaaag aacaagcatt ggatttttga aaagaagcgc gattgtcaga       600
     tttgaattcc tatcatataa atacaacaat gatttaacaa tgtcagaacg tgaaaaatta       660
     cctgtttggg cttctcattt aatagctcgt atgaacgtgg acaatgtttc tttaccattg       720
     gaaattagtt gtagtgcaat caatcccacc caacattttg ctattatggt tcttaaaaat       780
     gctaaaacca atgtgacaag aggcagattc tggactgtgt tggacgatga acgtgacttt       840
     ttatccatta aaaccgatat tcaagcgatt gaatttgaac gtaattccgt aaccactgct       900
     ggcaacttaa gacatgtttt aaacaattgt ttaacattag gcgaaccctt cgccttcgac       960
     ccacttgatt attcttttaa actcaactta cttgaaacag ggttatctcc attagatgac      1020
     gttgtgacca ttagattgaa agatttgctg cgtgtgttca aagaagggca ggatgttcaa      1080
     attatcggta ataaaggagt aggtaagtct gaaattggtg caatgttagc agcacgatat      1140
     cctcatcttt tagttgttga tagtgatgat tatggcaggt ttttggtaat gttacttaat      1200
     ttagttcctt cattgtttaa aaattatgat tttgaaatta acgaagaact tttaaccgaa      1260
     gaaatttatt ttcaagccat gtctgatttt attaaagcca aacaaactga agatgtttcg      1320
     cttcaaacga tttttgagta tgtaatggaa ggaataattc ttcccaacac tattgagagt      1380
     ggagaagcta atgaggaagt tattttagac atttttaatc gtgtttttca tagcatccaa      1440
     ggttctaaat ttattggata tcgtaagttc atgatcgaat atacgcgtct aatgtacact      1500
     aattttaaca agagtcaaac ttgtcatttc gtccactcgt attgtgaatt gtctttcgtt      1560
     cctcattcct tggcgtatat tactttatac agcagttaca actcagctgt gttaaatgtt      1620
     gttcctagaa acggacaagt agaatgcagt tcttcaaaga tgatggccaa tacgctactt      1680
     catcattttt acgaaagata tacttctaat atgaatccaa ccccagtatt tttgttttct      1740
     tatttctttg gtttaaccaa aggtttaaac gttctgaaag cttcatctat tattgtgtaa      1800
     cattattatg tttttgtgaa gaatatcatg tccttttagg gttcgactcg tataaaggtg      1860
     tttcagtcca atatcttgat ggcagactag gtcgatgttt gattctagtg aagtgtgcga      1920
     aaattcagct attgtc                                                      1936
//