ID   JX028594; SV 1; linear; genomic RNA; STD; VRL; 939 BP.
XX
AC   JX028594;
XX
DT   15-FEB-2013 (Rel. 115, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Watermelon mosaic virus isolate HQ11-66 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Watermelon mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-939
RA   Salvaudon L., De Moraes C.M., Mescher M.C.;
RT   "Outcomes of co-infection by two potyviruses: implications for the
RT   evolution of manipulative strategies";
RL   Proc. Biol. Sci. 280:1756-1756(2013).
XX
RN   [2]
RP   1-939
RA   Salvaudon L., De Moraes C.M., Mescher M.C.;
RT   ;
RL   Submitted (08-MAY-2012) to the INSDC.
RL   Laboratoire Ecologie Systematique et Evolution, Universite Paris-Sud 11, 15
RL   avenue Georges Clemenceau, Orsay 91400, France
XX
DR   MD5; aed9485e744bee70b9015678ea9f70db.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..939
FT                   /organism="Watermelon mosaic virus"
FT                   /host="Cucurbita pepo var. ozarkana"
FT                   /isolate="HQ11-66"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Sep-2009"
FT                   /PCR_primers="fwd_name: WCP1-F, fwd_seq:
FT                   agctccatacatagctgagacagca, rev_name: WCP1-R, rev_seq:
FT                   acgacccgaaatgctaactgtgacc"
FT                   /db_xref="taxon:146500"
FT   CDS             <1..>939
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:M1F5Y8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:M1F5Y8"
FT                   /protein_id="AFO53513.1"
FT                   /translation="VNTQPSELQRYLEVLDFNHTDGCCESVSLQSGKEKETVENLDAGK
FT                   DSKKDTSGKGDKPQNLQTGQGSKESTKADTVSKDVNVGSKGKEVPRLQKITKKMNLPTV
FT                   GGKIILSLDHLLEYKPNQVDLFNTRATKTQFESWYSAVKVEYDLNDEQMGVIMNGFMVW
FT                   CIDNGTSPDVNGVWVMMDGEEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSE
FT                   SPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAALAGINSRLFGLD
FT                   GNISTNSENTERHTAKDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1..90
FT                   /product="nuclear inclusion b"
FT   mat_peptide     91..939
FT                   /product="coat protein"
XX
SQ   Sequence 939 BP; 331 A; 165 C; 225 G; 218 T; 0 other;
     gttaacacac aaccaagtga attgcaaaga taccttgaag ttctggattt caaccacact        60
     gatggttgct gcgagtcagt gtctctgcaa tcaggaaaag aaaaagaaac agtggaaaat       120
     ttggatgcag gaaaggattc gaagaaggac accagtggta aaggtgataa gccacaaaac       180
     ctgcaaactg ggcagggtag caaggaatca acaaaagctg acacagtcag caaagatgtg       240
     aacgttggat caaaaggaaa agaagtccca cgactacaga agataacaaa gaaaatgaac       300
     cttccaacag ttggtgggaa aatcattctc agcttagacc atttgctcga atataagccc       360
     aatcaagttg atttgtttaa cactcgagca acaaagacac agtttgaatc atggtacagc       420
     gcagttaaag ttgaatatga tcttaatgat gagcagatgg gtgtgattat gaatggtttt       480
     atggtttggt gcattgataa tggtacatct ccagatgtca atggagtatg ggtgatgatg       540
     gatggggaag agcaagttga gtacccacta aagccaattg ttgaaaatgc aaagccaact       600
     ttaagacaga tcatgcatca tttctcagac gcagcagaag catatattga gatgagaaac       660
     tctgaaagtc cgtatatgcc tagatacgga ttactaagaa atttgagaga cagggaatta       720
     gcacgctatg cttttgactt ctatgaggtt acttccaaaa caccaaatag ggcaagagaa       780
     gcaatagcac agatgaaggc cgcagctctc gcgggaatta acagcaggtt atttggactt       840
     gatggcaata tctcgaccaa ttccgaaaat actgagaggc acactgcaaa ggacgttaat       900
     cagaatatgc atactttgtt gggtatgggt ccaccgcag                              939
//