ID   JX028593; SV 1; linear; genomic RNA; STD; VRL; 883 BP.
XX
AC   JX028593;
XX
DT   15-FEB-2013 (Rel. 115, Created)
DT   15-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Zucchini yellow mosaic virus isolate RSHS polyprotein gene, partial cds.
XX
KW   .
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OS   Zucchini yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-883
RA   Salvaudon L., De Moraes C.M., Mescher M.C.;
RT   "Outcomes of co-infection by two potyviruses: implications for the
RT   evolution of manipulative strategies";
RL   Proc. Biol. Sci. 280:1756-1756(2013).
XX
RN   [2]
RP   1-883
RA   Salvaudon L., De Moraes C.M., Mescher M.C.;
RT   ;
RL   Submitted (08-MAY-2012) to the INSDC.
RL   Laboratoire Ecologie Systematique et Evolution, Universite Paris-Sud 11, 15
RL   avenue Georges Clemenceau, Orsay 91400, France
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DR   MD5; 26a31fd40cf0e1d6dae31bf77e540c2d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..883
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="Cucurbita pepo var. texana"
FT                   /isolate="RSHS"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Sep-2007"
FT                   /PCR_primers="fwd_name: ZYCP1-F, fwd_seq:
FT                   aagtgaattggcacgcta, rev_name: ZYCP1-R, rev_seq:
FT                   cggtaaatattagaattacgtcg"
FT                   /db_xref="taxon:12232"
FT   CDS             <1..870
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:M1F6Y8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:M1F6Y8"
FT                   /protein_id="AFO53512.1"
FT                   /translation="FEQGDTVMLQSGTQPTVSDAGATKKDKEDDKGKNKDVTGSGSGER
FT                   TVAAVTKDKDVNAGSHGKIVPRLSKITKKMSLPRVKGNVILDIDHLLEYKPDQIELYNT
FT                   RASHQQFASWFNQVKTEYDLNEQQMGVVMNGFMVWCIENGTSPDINGVWVMMDGNEQVE
FT                   YPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNAEAPYMPRYGLLRNLRDRSLARYAFD
FT                   FYEVNSKTPERAREAVAQMKAAALSNVSSRLFGLDGNVATTSEDTERHTARDVNRNMHT
FT                   LLGVNTMQ"
FT   mat_peptide     <1..30
FT                   /product="nuclear inclusion b"
FT   mat_peptide     31..867
FT                   /product="coat protein"
XX
SQ   Sequence 883 BP; 281 A; 168 C; 226 G; 208 T; 0 other;
     tttgaacaag gagacactgt gatgctccaa tcaggcactc agccaactgt gtcagatgct        60
     ggagctacaa agaaagacaa agaagatgac aaagggaaaa acaaggacgt tacaggctcc       120
     ggctcaggcg agagaacagt agcagctgtc acgaaggaca aggatgtgaa tgctggttct       180
     catgggaaaa ttgtgccgcg tctttcgaag atcacaaaga aaatgtcatt gccacgcgtg       240
     aaaggaaatg tgatactcga tattgatcat ttgctggaat ataaaccgga tcaaattgag       300
     ttatataaca cacgagcgtc tcatcagcag ttcgcctctt ggttcaacca ggttaagacg       360
     gaatatgatt tgaacgagca acagatggga gttgtaatga atggtttcat ggtttggtgt       420
     attgaaaatg gcacttcacc cgacattaat ggagtgtggg ttatgatgga cggaaatgag       480
     caagttgagt atcccttgaa accaatagtt gaaaatgcaa agccaacgct gcggcaaata       540
     atgcatcatt tttcagatgc agcggaggca tatatagaga tgagaaatgc agaggcacca       600
     tacatgccga ggtatggttt gcttcgaaac ctacgggata ggagtttagc acgatatgct       660
     ttcgatttct atgaagtcaa ttctaaaact cctgaaagag cccgcgaagc tgttgcgcag       720
     atgaaagcag cagctcttag caatgtttct tcaaggttgt ttggccttga tggaaatgtc       780
     gccaccacta gcgaagacac tgaacggcac actgcacgtg atgttaatag aaacatgcac       840
     accttactag gtgtgaatac aatgcagtaa agggtaggcc gcc                         883
//