ID JX014247; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC JX014247; XX DT 25-JUL-2012 (Rel. 113, Created) DT 25-JUL-2012 (Rel. 113, Last updated, Version 1) XX DE Cucumber mosaic virus isolate Va segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RA Kim M.K., Kwak H.R., Lee S.H., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "First report of Cucumber mosaic virus isolated from Phaseolus nipponensis RT in Korea"; RL Unpublished. XX RN [2] RP 1-3049 RA Kim M.K., Kwak H.R., Lee S.H., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (03-MAY-2012) to the INSDC. RL Department of Agricultural Biology, Crop Protection Division, National RL Academy of Agricultural Science, 126 Suin-Ro, Suwon, Gyeonggido 441-707, RL Republic of Korea XX DR MD5; 5be5e10ff119f8c3ab6e6b6d2ac83ed3. DR EuropePMC; PMC4174850; 25289004. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Vigna angularis var. nipponensis" FT /isolate="Va" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2004" FT /note="subgroup: I" FT /db_xref="taxon:12305" FT CDS 87..2660 FT /codon_start=1 FT /product="2a protein" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:I7B361" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:I7B361" FT /protein_id="AFN88456.1" FT /translation="MASPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLIAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMAGALLLAPRTSNRTMKCFEDLVAAIYTKSDFYYGEEC FT EADDVQMDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTLAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDSDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKLRKKYGIERRCNDKRRTPTGSYGGGEEAETKISQAESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVEPPCERGGVTRA" FT CDS 2419..2751 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q96712" FT /protein_id="AFN88457.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSSRHVNVAELPEPEASRLELSAEDHEFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3049 BP; 774 A; 680 C; 708 G; 887 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttt 60 aaaactttct ttctagtatc ttttctatgg cttcccctgc ccccgcattc tcactagcca 120 atcttttgaa cggtagttat ggtgtcgaca ctcccgagga tgtggaacgt ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaactacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgcgcatt ccctccgaac tcctgacgga gctcccgctg 300 aagcggtgtc tgatgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tatcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccccgcgtt taataaatgt tcttttattt ccagcattgc tatggccgga gctttgctgt 480 tggcacctag aacatccaac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctat tatggtgaag agtgtgaagc tgacgacgtt cagatggata 600 tctcgtctcg cgatgtaccc ggttattctt tcgaaccgtg gtcccgaacg tctggattcg 660 aaccgccgcc catttgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgtttcgatt 720 tcaatgcttt aaagaaatcg tgcgctgaga ggactttcgc tgatgactat gttattgaag 780 gtttagatgg tgttgttgat aatgcgactc tgttgtcgaa tttgggtcca tttttggtac 840 ctgtgaagtg ccaatatgaa aaatgtccaa caccaaccct cgcgattcct ccggatttaa 900 atcgtgctac tgatcgtgtt gatattaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taattacgac gactcttttc atcaagtgtt tgtcgaaagt gcagactact 1020 ctatagatct ggatcatgtt agacttcgac agtctgatct tatcgcgaaa attccagatt 1080 cagggcatat gataccggtt ctgaacaccg ggagcggtca caagagagta ggtacaacga 1140 aggaggtcct tacagcaatt aagaaacgta atgctgacgt tccagagctg ggtgattccg 1200 ttaatctgtc tagattgagt aaagctgtgg ctgagagatt tttcatttca tacatcaatg 1260 gtaactctct agcatccagt aactttgtca atgtcgttag taacttccac gattacatgg 1320 aaaaatggaa gtcctcaggt ctttcttatg atgatctccc agatcttcat gctgagaatt 1380 tacagtttta tgatcacatg ataaaatctg atgtgaaacc tgtggtgagc gacacactca 1440 atatcgacag accggttcca gctactataa cgtatcataa gaagagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgcctccga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg atttgatgtc aaaaacaagc 1620 actgcctcga aattgatctg tctaagtttg ataaatctca aggtgaattc catttgctaa 1680 ttcaggaaca tattttgaat ggtctaggat gtccagctcc gataactaag tggtggtgtg 1740 attttcaccg attctcttac attagagacc gtagagctgg tgttggtatg cctattagtt 1800 tccagagacg aactggtgat gcattcactt attttggcaa taccattgtc accatggcag 1860 agtttgcctg gtgttacgac accgaccaat tcgaaaagct tttattctcg ggcgatgact 1920 ctctaggatt ttcattgctt ccccctgttg gtgatccgag taaattcaca actcttttca 1980 acatggaagc taaggtgatg gaacctgcag taccatatat ttgttcgaag ttcttactct 2040 ctgacgagtt cggtaacaca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gaacaaagaa aattccctat tctgacagtg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg attgaagttt ttggaccgaa tgtctcagtc gtgtatcgat cagctttcaa 2220 ttttctttga attgaaatac aagaagtctg gggaagaggc tgctttaatg ttaggcgcct 2280 ttaagaaata taccgctaat tttcagtcct acaaggaact ctactattca gatcgtcgtc 2340 agtgcgaatt gatcaattcg ttttgtagta cagagttcag ggttgagcgt gtaaattcca 2400 ataaacttcg aaagaaatat ggaattgaac gtaggtgcaa tgacaaacgt cgaactccaa 2460 ctggctcgta tggtggaggc gaagaagcag agacgaagat ctcacaagca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagact gttccgcttc 2580 ctaccgttct atcaagtaga tggttcggaa ctgacagggt cgagccgcca tgtgaacgtg 2640 gcggagttac ccgagcctga ggcctctcgt ttagagttat cggcggaaga ccatgagttt 2700 gacgatacgg attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcaact ccctccggtc ctgtggcggg agctgagttg gcagtattgc tataaactgt 2820 ctgaagtcac taaacacatt gtggtgaacg ggttgtccat ccagcttacg gctaaaatgg 2880 tcagtcgtag agaaatctac gccagcagac ttacaagtct ctgaggcacc tttgaaacca 2940 tctcctaggt ttcttcggaa ggactccggt ccgtgtactt ctagcacaac gtgctagttt 3000 agggtacggg tgccccccca ctttcgtggg ggcctccaaa aggagacca 3049 //