ID   JQ979170; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   JQ979170;
XX
DT   13-MAY-2012 (Rel. 112, Created)
DT   13-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Pepino mosaic virus isolate PepMV-KK coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-714
RA   Zizyte M., Sneideris D., Zitikaite I., Urbanaviciene L., Staniulis J.;
RT   "Pepino mosaic virus infecting tomato plants in Lithuania";
RL   Unpublished.
XX
RN   [2]
RP   1-714
RA   Zizyte M., Sneideris D.;
RT   ;
RL   Submitted (26-APR-2012) to the INSDC.
RL   Institute of Botany, Nature Research Centre, Zaliuju ezeru 49, Vilnius,
RL   Vilnius 08406, Lithuania
XX
DR   MD5; f7f416068279d10f18cfe3c249a7dfb8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..714
FT                   /organism="Pepino mosaic virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="PepMV-KK"
FT                   /mol_type="genomic RNA"
FT                   /country="Lithuania"
FT                   /collected_by="M. Zizyte, D. Sneideris"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: peptgb-f, fwd_seq:
FT                   cacaccagaagtgcttaaagca, rev_name: peputr-r, rev_seq:
FT                   ctctgattaagtttcgagtg"
FT                   /db_xref="taxon:112229"
FT   gene            1..714
FT                   /gene="CP"
FT   CDS             1..714
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2UVL7"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q2UVL7"
FT                   /protein_id="AFJ15524.1"
FT                   /translation="MENQPTASNPSDVPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 193 A; 193 C; 146 G; 182 T; 0 other;
     atggaaaacc aacctacagc ttctaaccca tcagatgtac caccaactgc tgctcaagct        60
     ggtgcccaga gcccagccga cttctcaaat cctaatacag ctccttccct aagtgatttg       120
     aagaagatca aatacgtgtc aactgtcact tcagttgcca cgcctgctga aattgaggcc       180
     cttggcaaga tctttactgc catgggttta gcagccaatg agaccggacc tgccatgtgg       240
     gacctcgctc gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc       300
     acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga tcgtatcaat       360
     atcacaccca gacaattctg catgtatttt gcaaaaattg tttggaacat actgttagac       420
     agcaatgtgc cacctgccaa ctgggcaaaa ttgggctatc aggaagatac caagtttgct       480
     gcttttgact tctttgatgg agtcacaaat ccagctagtc tacagcctgc tgatggccta       540
     atcaggcagc ccaatgaaaa agagcttgct gctcactcgg ttgctaaata tggtgccctt       600
     gcccgccaga aaatatccac tggtaactac atcaccaccc ttggtgaagt tacacgtggt       660
     cacatgggcg gcgccaacac tatgtacgca attgatgcac ctcctgaact ttaa             714
//