ID   JQ979169; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
XX
AC   JQ979169;
XX
DT   13-MAY-2012 (Rel. 112, Created)
DT   13-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Pepino mosaic virus isolate PepMV-NV coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-714
RA   Zizyte M., Sneideris D., Zitikaite I., Urbanaviciene L., Staniulis J.;
RT   "Pepino mosaic virus infecting tomato plants in Lithuania";
RL   Unpublished.
XX
RN   [2]
RP   1-714
RA   Zizyte M., Sneideris D.;
RT   ;
RL   Submitted (26-APR-2012) to the INSDC.
RL   Institute of Botany, Nature Research Centre, Zaliuju ezeru 49, Vilnius,
RL   Vilnius 08406, Lithuania
XX
DR   MD5; 2fc8363d201201c4c82dc9996d6df8a3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..714
FT                   /organism="Pepino mosaic virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="PepMV-NV"
FT                   /mol_type="genomic RNA"
FT                   /country="Lithuania"
FT                   /collected_by="M. Zizyte, D. Sneideris"
FT                   /collection_date="2011"
FT                   /PCR_primers="fwd_name: peptgb-f, fwd_seq:
FT                   cacaccagaagtgcttaaagca, rev_name: peputr-r, rev_seq:
FT                   ctctgattaagtttcgagtg"
FT                   /db_xref="taxon:112229"
FT   gene            1..714
FT                   /gene="CP"
FT   CDS             1..714
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:I1Z8B3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:I1Z8B3"
FT                   /protein_id="AFJ15523.1"
FT                   /translation="MHDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 714 BP; 194 A; 202 C; 151 G; 167 T; 0 other;
     atgcatgaca caacacctgt tgctgccact tcaagtgcac cacccacagc caaagatgct        60
     ggtgccaaag ctccttctga cttctcaaat cccaatacag ctcctagtct cagtgatttg       120
     aagaaagtca agtatgtctc caccgtgacc tccgtggcca caccagctga aattgaagcc       180
     ctaggcaaaa tcttcaccgc tatgggcctt gcggccaatg agactggtcc ggccatgtgg       240
     gatctagctc gtgcatatgc tgatgtgcag agttctaaat cggcacagct gattggagct       300
     accccttcca accctgcact atcacgccga gcccttgctg ctcagtttga tcgaatcaat       360
     ataaccccca ggcaattttg catgtacttt gccaaagttg tttggaacat acttctcgac       420
     agcaacattc caccagcaaa ttgggccaaa cttggttacc aagaagatac aaaatttgct       480
     gcatttgact tcttcgatgg agtcaccaac cctgccagcc tgcagcctgc tgatggtctt       540
     atcaggcagc caaatgagaa agaactagct gctcactccg tagctaagta cggcgccttg       600
     gctaggcaaa agatctccac aggtaattat attaccacac ttggagaagt cacacgtgga       660
     cacatgggag gagctaacac catgtacgcg atagacgcac cccctgaact ttaa             714
//