ID   JQ968537; SV 1; linear; genomic RNA; STD; VRL; 981 BP.
XX
AC   JQ968537;
XX
DT   29-JUL-2012 (Rel. 113, Created)
DT   05-APR-2013 (Rel. 116, Last updated, Version 3)
XX
DE   Velvet tobacco mottle virus clone PMK24 P1 (P1) gene, complete cds; and P2a
DE   gene, partial cds.
XX
KW   .
XX
OS   Velvet tobacco mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-981
RX   DOI; 10.1007/s11262-012-0801-2.
RX   PUBMED; 22983896.
RA   Arthur K., Collins N.C., Randles J.W.;
RT   "Mutation rate in Velvet tobacco mottle virus varies between genomic region
RT   and virus variant but is not influenced by obligatory mirid transmission";
RL   Virus Genes 45(3):575-580(2012).
XX
RN   [2]
RP   1-981
RA   Arthur K.R., Collins N.C., Randles J.W.;
RT   ;
RL   Submitted (22-APR-2012) to the INSDC.
RL   School of Agriculture, Food and Wine, University of Adelaide, Waite Rd.,
RL   Adelaide, SA 5064, Australia
XX
DR   MD5; bdb40329c9b7f9af9d2753eef2c75cfd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..981
FT                   /organism="Velvet tobacco mottle virus"
FT                   /isolate="VTMoV-K1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /isolation_source="mechanical transmission 24 months"
FT                   /collected_by="Kieren Arthur"
FT                   /collection_date="Jul-2010"
FT                   /clone="PMK24"
FT                   /PCR_primers="fwd_name: vtmov-5utrf, fwd_seq:
FT                   atattgaagggaaagtcttgc, rev_name: vtmov-2ar6, rev_seq:
FT                   agacaacgagagactttggttca"
FT                   /db_xref="taxon:12473"
FT   gene            46..504
FT                   /gene="P1"
FT   CDS             46..504
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="P1"
FT                   /db_xref="UniProtKB/TrEMBL:I6ZW21"
FT                   /protein_id="AFN89795.1"
FT                   /translation="MPSIDVEVEKILHLSNRKRLRSVCVARKKTFVDKISEGFVCTLYG
FT                   EYDHDYVTSVHLHIVCSCGRAFFDFVEFKDIKLRDFQYQSQCICPTRNWSTVAYTDFTT
FT                   INCQVEGCDYCEGIESDSDSDSEAIIEEFLQKFSEVGISGSSSSPQTN"
FT   CDS             561..>981
FT                   /codon_start=1
FT                   /product="P2a"
FT                   /db_xref="GOA:I7B0R0"
FT                   /db_xref="UniProtKB/TrEMBL:I7B0R0"
FT                   /protein_id="AFN89796.1"
FT                   /translation="MLSELVQLCLSATMTLALVVSMMLDPSYGWLITMSVMLVSLELTI
FT                   RPFRRSLDYMKIVVRDEPNEPEVARIVGAPTYHPIHGVVCKCLWNSKEFNVVVQPSLWP
FT                   LAFPPNISQGVVKEGAMIGVPFTSLPSGAEPKSLVV"
XX
SQ   Sequence 981 BP; 250 A; 208 C; 238 G; 285 T; 0 other;
     atattgaagg gaaagtcttg cactcagtac ccattatatt ttgatatgcc cagcattgat        60
     gttgaagtag aaaagatcct gcacttgagc aacagaaaga gactaaggtc tgtctgtgtg       120
     gcgaggaaga agacgttcgt agacaagata tccgaaggat ttgtctgcac tctttacgga       180
     gagtacgatc acgactacgt caccagtgtg catttgcaca ttgtttgctc gtgcggtaga       240
     gctttctttg attttgttga gttcaaggac ataaaactcc gagatttcca atatcaaagt       300
     cagtgtatct gtcccaccag gaattggtcg acggtcgctt acactgattt tactaccatc       360
     aactgccaag tggaaggttg tgattactgt gaggggattg agtcagactc tgattcggat       420
     tctgaggcca tcatagagga atttcttcaa aagttttccg aggttggcat ctctggatcg       480
     tccagttctc cccagactaa ctaggactcg gttccgttta ttttcttaca aatcatttaa       540
     ttgttttgta attgagaaag atgttgagcg agttagtcca gttgtgtctt tcagcaacca       600
     tgactctagc gctggtagtg tcaatgatgc tggacccgag ctacgggtgg ctgatcacca       660
     tgtctgtgat gttagtctcc ttagagctga caatcaggcc gttcaggcgc tctctagact       720
     acatgaaaat tgtggtccga gatgagccca atgagcctga agttgctagg atagtaggcg       780
     cgccaactta ccacccaatt catggcgttg tttgcaagtg tctgtggaac tcgaaagagt       840
     tcaatgtggt tgtgcaaccc agtttgtggc ctctagcctt tcccccaaac atatcacaag       900
     gggtagtaaa ggaaggagct atgataggtg taccattcac atccctaccc tctggagctg       960
     aaccaaagtc tctcgttgtc t                                                 981
//