ID JQ956376; SV 1; linear; viral cRNA; STD; VRL; 6333 BP. XX AC JQ956376; XX DT 31-JUL-2012 (Rel. 113, Created) DT 31-JUL-2012 (Rel. 113, Last updated, Version 1) XX DE Bhanja virus strain M3811 segment L, complete sequence. XX KW . XX OS Bhanja virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus; unclassified Phlebovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-6333 RX DOI; 10.1007/s11262-012-0785-y. RX PUBMED; 22806684. RA Dilcher M., Alves M.J., Finkeisen D., Hufert F., Weidmann M.; RT "Genetic characterization of Bhanja virus and Palma virus, two tick-borne RT phleboviruses"; RL Virus Genes 45(2):311-315(2012). XX RN [2] RP 1-6333 RA Dilcher M., Alves M.J., Finkeisen D., Hufert F.T., Weidmann M.; RT ; RL Submitted (18-APR-2012) to the INSDC. RL Department of Virology, University Medical Center Goettingen, Kreuzbergring RL 57, Goettingen, Lower Saxony D-37075, Germany XX DR MD5; b51a8e079c42ccccfdb860ed0ae0696e. DR EuropePMC; PMC3957954; 24390329. DR EuropePMC; PMC6164824; 30223439. XX FH Key Location/Qualifiers FH FT source 1..6333 FT /organism="Bhanja virus" FT /segment="L" FT /strain="M3811" FT /mol_type="viral cRNA" FT /note="passaged in Vero-E6 cells" FT /db_xref="taxon:1213620" FT gene 17..6265 FT /gene="RdRP" FT CDS 17..6265 FT /codon_start=1 FT /gene="RdRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:I7CCL9" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR022531" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:I7CCL9" FT /protein_id="AFO66272.1" FT /translation="METRIQDTRINFPRRDELTAEGILYHAQLDDTTLPAFSIQETESS FT LSLEIDEVPDSVSQIGSSIALGATRIEVGQISTLVHDFTFAVVSEDTDEPLSRHFPVMN FT DGEDHLTPDMIIDVTQTERRVVEFATHRGAGHRGVLNYFNQKMEKYKRPLALRRERTGW FT HITLSCISVGTDHVVSDLRLPQNLVDELVYRFRFACAVMAQILVAFPGLAPQLSEEVTQ FT NERRGIECVELLTQNLVGDGPGPKTGVFPLGEKEILDNFLMGSEDGEYLKTVFTRTFND FT SLKEIRQEHVPEGMHRNGALRKNQGEALSQMTNLQEEMLADYSKQSRAPPENKYKSTIK FT IPPWLIPATKRDINVCPDPDDLDGLSDETVTSRVWKSALTDTFFSGNPGWQENIDREVS FT LASGILITEDAENLKTEFHRTKLNLTSQDWVALATRGIEGKALRHEDTVKTADEESHQT FT LSPLSDTSGIESCLESNNWFHQARSQKEHLFQDLDQLIEASLEVSCESQGLRDSVLTTF FT KNYRNTNAVHWACMVTQLATELSISAKQSCKKHQFILKKLPNFPVLVLIKTSRSGSHVF FT YSLAAKASDITGELDGQVFKNYERSGAWFITEFNSVKLCKLENMIKLPMLIISMLAYFQ FT ETEEKLVTKYSRPTLFTRKMTTLAILTCMEDKSLTEELITIQRYIQMEGFVSEPLLPKP FT QKMLEKLSVPLRTTLQVYLFKQCMSSIRIISGSPFKRLSRGGEVVWRGCFAGCLGISCS FT PEQMVNSWYLGYLKNKDEDTEVNMLSAMYEKIVKVEEKRPEKDDNLVGGDPINPKMHEF FT SGSFIKFMARALDDEISQRRGKNWRQDLTAQFYRSLGSITLDQMATLKASSNFSEEWEE FT FEESRMKEYHRVKVIERIADLVNQGHTYYTDCLGRCFKVVLEDGCMRICLFKKAQHGGL FT REIYVLRLEERMIQFGIELLARKINEAVGHETISVPSRKEEILDTHQVRAAKACGEGTM FT ITLCSSNDARTWNQGHYTTKFAFLMCELMPKELHGLIWASCAIFRRKKMMLNLDYLNSI FT AKHKEGLKGFKKRLHDGFSGNDEVPWVKKGKTYILTETGMMQGILHLTSSLYHAAYQAA FT VRKLIRTKLKTLVGCRVLIDVIEGSDDSAIIISGAVKSGEEEIRFRLAASACLLWIKHL FT GVYAGIYMSPKSTIGCLDVCEYNSEFRFARLMCRPTFKWVCASLNIPEVEKISDRQEAF FT ANLLTSVLEGGGTSSLCSILQMCQAWCHYILLGLWSSCVFKSIIPHLISGKNPDVGFFL FT LDNPVCSGILGFRHNLWRFVRKTELSNIYARTLDNRALDGFVLTSGGSLSKSHLIRWGD FT RKKLEQMKERSGLVENWQEQTDDDPSVLYKNPSTNKEVKLLLCIKIDSPGVAESLSKGN FT VLGRVLASSVYVLQRRCITAKRSKRKYTLMELALEQDPNYRALTLAEESAIFGDIVSLE FT KNETMSQIYSHANGVLIAKSREMRRAKVEVLSADESFRAPPVKIMGDVFFGTTRSHMGA FT NMLNRELHYLKESFPWISNDPHDCLNQSPFSSQAEMKTFFEKLEQKTRKVRMIGAAVFT FT RMGQTSLENLIRFNFQKNFELSKSEVSDSDYSDEDEKFCRHVVTMILSGPFTNERKECM FT LIDFLKNSSLGPPKQLLRRSRTNVLRVVRSWLDGHARIEELVEKSMDGICGAFTIRQKV FT FKDKKGNVSYKGLGVWTGRIEGTDCKLQIESGFASDQILKQVVIASDRSLSDFLPGLER FT LCKELKVINPRKPFPVKEAERQNFIGALVDFRLESRFSRAGAPVLLVPQHEGFLKEMMD FT RSDISLVVRSDVLNIRADLGDGRLITMLSYKSSGQDADSEQGNQFFSRRESLSKKFGWA FT IREPYLSWISLGPIPDALVPRLKEEMTGRRRTEGIDGDQLRDIFKRCCKGSLRRKGLTV FT GQYSNVRLRIEDTSEDVDIDLLELLDEDVDFGDTLQSQNIQDLEASIEEMEVLFGEDDL FT EVFDFTEVISRSDPLAYHGFCDRIIEDYIKRLGHEAIRKAIQKRECTQSDYPLVKNLFE FT SIGENPDELSVLPDKDDAYASSGLITEDLWG" XX SQ Sequence 6333 BP; 1910 A; 1291 C; 1555 G; 1577 T; 0 other; acacagagac gccagcatgg aaacaaggat acaagacact cgtataaact tcccaaggag 60 agatgagcta actgctgaag gtatcctgta tcatgctcag ctcgatgaca caactcttcc 120 tgccttcagc atccaagaaa cagagtcctc gctttctctt gagattgatg aggtccctga 180 tagtgtcagt cagattggca gcagtatagc tttgggagca acaagaattg aagttggcca 240 aatatctact ctggtgcatg acttcacttt tgctgttgta tctgaagata cagatgagcc 300 tctctcacga cattttccag tgatgaatga tggagaagac cacctaactc ctgacatgat 360 cattgatgta acccaaacag aaagacgggt tgtggagttt gccacacata ggggtgctgg 420 tcacaggggg gttttaaact acttcaacca gaaaatggag aagtacaaaa ggcctttagc 480 cctcaggagg gagagaactg gttggcacat cacattatcg tgcatttctg tgggcacaga 540 tcatgtagtt tcagatctga gacttcccca gaatttagtt gatgagctcg tctacagatt 600 tcgctttgca tgtgctgtca tggcacaaat tctagtagct ttcccaggac ttgcccctca 660 actatcagaa gaagtcaccc agaacgaaag aagagggatt gagtgtgttg agctcctgac 720 ccaaaatctg gtaggtgatg gaccagggcc caaaacaggg gttttccctc ttggagagaa 780 agaaatcctt gacaacttcc taatggggag tgaggatggg gagtacctta agaccgtctt 840 caccaggacc ttcaacgata gcctgaaaga aattagacag gagcatgtgc ctgagggcat 900 gcacaggaat ggagcactca ggaaaaacca gggcgaggct ctaagtcaga tgacaaacct 960 ccaggaggaa atgctagcgg attactcaaa acagtcgaga gcaccccctg aaaacaaata 1020 caagtccact atcaagatac ctccttggct aatcccagca actaaaagag acatcaatgt 1080 atgtcctgac ccagatgatc tggatggtct ttccgacgag actgtgacct ctcgagtctg 1140 gaaaagtgca ctaacagaca ctttcttttc aggcaaccca ggatggcagg aaaatattga 1200 cagagaagtt tcattggcca gtggcatact catcacagag gatgctgaaa acctgaaaac 1260 agagttccat aggacaaagc tcaacctgac ttctcaagac tgggttgctt tagcaactag 1320 aggcattgaa ggcaaggccc tcagacatga ggatactgtg aagaccgcag atgaggagtc 1380 tcaccaaact cttagtcctc tgtcagacac ctcaggaatc gagtcctgtt tagagagtaa 1440 caactggttc catcaggctc gaagtcaaaa ggagcacttg tttcaagatc tggatcagct 1500 gatcgaggcc tcccttgagg tatcttgtga atctcaagga cttcgagact ctgttttaac 1560 caccttcaag aactacagaa acaccaatgc tgtacactgg gcttgcatgg tgacgcagct 1620 tgctactgag ctatcaatct cagctaaaca aagctgcaag aagcaccagt tcattcttaa 1680 gaagctcccc aacttccctg tgctggtcct gattaagact agcaggtcag ggtctcacgt 1740 tttttacagt ttggctgcaa aggcaagtga cattacggga gaattggatg ggcaggtgtt 1800 taaaaattat gaaagatcag gtgcctggtt cattactgaa tttaactctg tgaaactttg 1860 caagttagag aacatgatta agttgcctat gctgattatc tctatgttgg catacttcca 1920 agaaactgag gagaagctag tcacaaagta tagccgtcca actctgttta caaggaagat 1980 gaccactctg gcaatcctaa cgtgtatgga agacaaatca ctgacagaag agctcatcac 2040 catccaaaga tacattcaga tggaaggatt tgtgagtgag ccacttctac caaaacctca 2100 aaaaatgcta gagaaactgt ctgtaccatt aagaactacc cttcaagttt atcttttcaa 2160 gcaatgcatg agtagcatta gaatcatctc aggtagtcct ttcaagaggc tgtctagggg 2220 gggagaggtt gtttggagag gctgctttgc tgggtgtctg ggcattagct gttctccaga 2280 acagatggtc aactcttggt atctgggcta cttgaagaat aaggatgaag acacagaagt 2340 gaacatgctc agcgccatgt atgaaaagat tgtaaaagta gaggagaaaa gaccagaaaa 2400 ggatgacaac ctagtgggag gagacccgat caaccctaaa atgcatgagt tttcaggatc 2460 tttcatcaaa ttcatggcta gagcccttga tgatgaaatc agccagagaa gagggaagaa 2520 ctggagacag gatctgacag cacaattcta cagatctcta gggtcaataa ctctggatca 2580 gatggccacc ttgaaagcca gcagcaactt ttcagaagag tgggaagaat ttgaagaatc 2640 tcgcatgaaa gagtaccata gggtgaaagt catagagagg attgctgact tggtcaatca 2700 aggacacact tactacactg actgtcttgg taggtgcttc aaagtggtgc tagaggatgg 2760 ctgcatgagg atctgtcttt ttaagaaagc acaacatgga ggtcttagag agatttatgt 2820 tctccgacta gaagagcgca tgattcaatt tggaatcgaa cttctagcaa gaaagattaa 2880 cgaggctgtt ggtcatgaaa ccatcagtgt tccttccaga aaagaagaga tattggatac 2940 acaccaggtt agggcagcaa aagcctgcgg agaaggaacc atgatcacac tctgcagctc 3000 aaatgatgct agaacctgga accaagggca ttatactacc aagtttgcat tcctaatgtg 3060 tgagctcatg cctaaggaac tgcacggcct aatttgggcc tcatgcgcca ttttccggag 3120 gaaaaaaatg atgctcaatc tagattactt gaacagcatt gcaaagcata aagaggggct 3180 aaagggattt aagaaaaggt tgcatgacgg gttctctggg aatgatgaag ttccctgggt 3240 caagaaaggc aagacttaca tcttgactga gacaggcatg atgcaaggca tactacacct 3300 aacttccagc ctctatcatg ctgcatacca ggcagctgtt agaaagctga tccgaactaa 3360 actaaagact ctagtaggct gtagagtcct tattgatgtc attgagggtt ctgatgacag 3420 tgccatcatc atctcaggtg cagtcaagag tggagaggaa gagattagat ttagactagc 3480 agcctcagct tgtttactgt ggattaagca cttgggggta tatgcaggaa tttacatgtc 3540 cccaaaaagc accataggtt gtcttgatgt ctgtgagtac aactcagagt tcaggtttgc 3600 gagactaatg tgcaggccta cattcaaatg ggtgtgtgcc agcttgaaca tcccagaagt 3660 ggaaaagatc tcggacagac aagaagcttt tgctaatctg ctaacctcag tcttagaggg 3720 aggaggaacc tctagcctgt gctccatttt gcagatgtgt caggcttggt gtcattacat 3780 ccttttggga ctttggtcct catgtgtttt caagagcata atcccacatc taatttctgg 3840 gaaaaaccca gatgtaggat ttttcctcct tgacaaccca gtttgttctg gcattctagg 3900 ctttcgccac aacctctgga ggtttgtcag aaagactgaa ctctcaaaca tttatgccag 3960 gacactagac aaccgggcac tggacggatt tgttttgaca tcaggaggaa gcctttctaa 4020 aagccacttg attcggtggg gagataggaa gaagttggaa cagatgaagg aaagatctgg 4080 cctagtggag aactggcaag agcaaactga tgatgaccct agtgtgttgt ataagaaccc 4140 atcaaccaac aaggaggtca aacttctact ctgtataaaa attgactctc caggtgttgc 4200 tgaaagtctc tccaaaggca atgttctagg cagggttttg gcctcctcag tgtatgtgct 4260 acagagaaga tgcatcactg caaagagaag caaaagaaag tacaccctga tggaactggc 4320 cttggagcag gatccaaatt acagagcatt gactctggct gaggagtctg ccatctttgg 4380 tgacatagtg tctttggaga agaatgagac catgtcacag atttacagcc atgccaatgg 4440 ggtgctaatc gctaagtcta gagagatgag gagagctaaa gttgaggtat taagtgcaga 4500 tgagagcttt agggctcctc ctgtcaagat aatgggagat gtcttctttg gaacaacgcg 4560 cagtcacatg ggagcaaata tgctcaatag ggaactccac tacctcaaag aaagcttccc 4620 ttggatatct aatgatcccc atgactgttt gaatcagtca cccttctcaa gtcaggctga 4680 gatgaagacc ttctttgaga agctagaaca gaaaaccaga aaagttagaa tgataggagc 4740 tgctgtgttc accagaatgg gccagacatc cttggagaat ctcataaggt tcaacttcca 4800 gaagaacttt gaactcagca agagtgaagt ctctgattct gattattcag atgaagatga 4860 gaagttctgc aggcatgttg ttaccatgat cctttctggc cctttcacta atgaaaggaa 4920 agagtgcatg ctcattgact ttcttaagaa ctctagccta ggaccaccaa agcaactctt 4980 gagaagaagc aggacaaatg tactgcgggt ggttcgctcc tggcttgatg gtcatgcacg 5040 gatagaagaa ttggttgaaa agagcatgga tggcatatgt ggggccttca ccataaggca 5100 aaaggtgttc aaggacaaaa agggcaatgt gagttacaag ggattaggtg tgtggaccgg 5160 cagaattgaa ggaacagatt gcaagcttca gattgaaagt gggtttgcat ctgaccaaat 5220 cttaaaacaa gttgtcattg cctctgacag aagtctgtct gacttcctgc ccggcttgga 5280 aagactttgc aaagaactga aggtcatcaa ccccagaaaa ccttttccag taaaagaagc 5340 tgaacgtcaa aactttattg gtgccctagt tgacttcagg ctggagtcaa gattttcaag 5400 agccggagcc ccagtcctat tggtgcctca acatgaaggt ttcctcaaag agatgatgga 5460 taggtctgac ataagccttg tggtcagatc agatgtgctg aacatcagag cagatttggg 5520 agatgggaga ttgataacaa tgttgagtta caagtcctca gggcaggatg ctgattcaga 5580 acaaggcaac caatttttca gcaggagaga atcactctca aaaaagtttg gttgggctat 5640 tagagagccc tacctcagtt ggattagctt agggccaatc cctgacgctc ttgttccaag 5700 attgaaggag gaaatgacag gaaggaggag gacagaaggg attgatggag atcagctcag 5760 ggatatcttc aaaagatgct gtaagggatc acttaggcga aaaggcttga ctgttggtca 5820 gtactccaac gtaagattga gaatagaaga cacatcagag gatgtagaca ttgaccttct 5880 cgagctgcta gatgaagatg ttgactttgg agatacttta cagtcacaga acattcaaga 5940 tcttgaggct agcatagaag agatggaagt tttgtttggg gaggatgacc ttgaagtttt 6000 tgatttcact gaagtgatct caagatctga cccgttagcc taccacggat tttgtgatag 6060 aatcattgag gactacatca aaaggctagg ccatgaggcc atcagaaaag ctatccagaa 6120 gagagaatgt acccaaagtg attaccctct tgtcaagaat ctctttgaaa gcattggcga 6180 gaaccctgac gagctgtcag tgctgcctga taaagatgac gcatatgcct cttctggcct 6240 cattacagaa gacttgtggg gttgacctct ttgccctttt cttcaaatct aaactttctg 6300 tatttctcta ttaacagctg gcggtctttg tgt 6333 //