ID   JQ955603; SV 1; linear; genomic RNA; STD; VRL; 480 BP.
XX
AC   JQ955603;
XX
DT   23-MAY-2012 (Rel. 112, Created)
DT   23-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Tobacco mild green mosaic virus strain EK-31 coat protein (CP) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tobacco mild green mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-480
RA   Rakhshandehroo F., Shirali N.;
RT   "Study on the genetic variations of TMGMV isolates in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-480
RA   Rakhshandehroo F., Shirali N.;
RT   ;
RL   Submitted (18-APR-2012) to the INSDC.
RL   Plant Pathology, Islamic Azad University, College of Agriculture and
RL   Natural Resources, Tehran 14515-775, Iran
XX
DR   MD5; 2f9cb8c1a8980da4170b274b21dd1230.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..480
FT                   /organism="Tobacco mild green mosaic virus"
FT                   /host="tomato"
FT                   /lab_host="tomato"
FT                   /strain="EK-31"
FT                   /isolate="Karaj"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /isolation_source="leaf"
FT                   /collected_by="Farshad Rakhshandehroo"
FT                   /collection_date="14-Apr-2011"
FT                   /identified_by="Farshad Rakhshandehroo"
FT                   /PCR_primers="fwd_name: tmgmv-spec, fwd_seq:
FT                   aartaaataayagtggtaagaaggg, rev_name: tob-uni 1, rev_seq:
FT                   aartaaataayagtggtaagaaggg"
FT                   /note="Virgaviridae"
FT                   /db_xref="taxon:12241"
FT   gene            1..480
FT                   /gene="CP"
FT   CDS             1..480
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="structural coating protein"
FT                   /db_xref="GOA:I3QPE2"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:I3QPE2"
FT                   /protein_id="AFK13341.1"
FT                   /translation="MSYSITSPSQFVFLSSVWADPIELLNVCTNSLGNQFQTQQARTTV
FT                   QQQFSEVWKPFPQSTVRFPGDVYKVYRYNAVLDPLITALLGAFDTRNRIIEVENQQSPT
FT                   TAETLDATRRVDDATVAIRSAINNLVNELVRGTGLYNQNTFESMSGLVWTSAPAS"
XX
SQ   Sequence 480 BP; 137 A; 97 C; 106 G; 140 T; 0 other;
     atgtcttact caatcacttc tccatcgcaa tttgtgtttt tgtcatctgt atgggctgac        60
     cctatagaat tgttaaacgt ttgtacaaat tcgttaggta accagtttca aacacagcaa       120
     gcaagaacta ctgttcaaca gcagttcagc gaggtgtgga aacctttccc tcagagcacc       180
     gtcagatttc ctggcgatgt ttataaggtg tacaggtaca atgcagtttt agatcctcta       240
     attactgcgt tgctgggggc tttcgatact aggaatagaa taatcgaagt agaaaaccag       300
     cagagtccga caacagctga aacgttagat gctacccgca gggtagacga cgctacggtt       360
     gcaattcggt ctgctataaa taatttagtt aatgaactag taagaggtac tggactgtac       420
     aatcagaata cttttgaaag tatgtctggg ttggtctgga cctctgcacc tgcatcttaa       480
//