Dbfetch

Dbfetch

ID   JQ954323; SV 1; linear; genomic RNA; STD; VRL; 801 BP.
XX
AC   JQ954323;
XX
DT   05-AUG-2012 (Rel. 113, Created)
DT   05-AUG-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Potato virus Y strain IT_104*1997 isolate 104 capsid protein gene, partial
DE   cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-801
RX   PUBMED; 22837421.
RA   Cuevas J., Delaunay A., Rupar M., Jacquot E., Elena S.F.;
RT   "Molecular evolution and phylogeography of potato virus Y based on the CP
RT   gene";
RL   J. Gen. Virol. 93(Pt 11):2496-2501(2012).
XX
RN   [2]
RP   1-801
RA   Delaunay A., Jacquot E.;
RT   ;
RL   Submitted (19-APR-2012) to the INSDC.
RL   UMR INRA-CIRAD-Montpellier SupAgro BGPI, INRA, Cirad TA A-54K, Campus
RL   international de Baillarguet, Montpellier cedex 5 34398, France
XX
DR   MD5; faf2693bc981c1f797f6bf98aa0246c3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..801
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /strain="IT_104*1997"
FT                   /isolate="104"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collected_by="Laura Tomassoli"
FT                   /collection_date="1997"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>801
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:I7DGY3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:I7DGY3"
FT                   /protein_id="AFO84348.1"
FT                   /translation="ANDTIDAGGSSKKDARPEQGSIQSNPNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPTSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDMGLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 801 BP; 268 A; 165 C; 201 G; 167 T; 0 other;
     gcaaatgaca caatcgatgc aggaggaagc agcaagaaag atgcaagacc agagcaaggc        60
     agcatccagt caaacccgaa caaaggaaaa gataaggatg tgaatgctgg tacatctggg       120
     acacatactg tgccgagaat caaggctatc acatccaaaa tgagaatgcc cacaagcaag       180
     ggagcaaccg tgctaaactt agaacacttg cttgagtatg ctccacaaca aattgacatt       240
     tcaaatactc gggcaactca atcacagttt gatacgtggt atgaggcagt gcggatggca       300
     tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt ttggtgcatt       360
     gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta tgatggatgg gaatgaacaa       420
     gtcgagtacc cgttgaaacc aatcgttgag aatgcaaaac caacccttag gcaaatcatg       480
     gcacatttct cagatgttgc agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat       540
     atgccacgat atggtttaat tcgaaatctg cgggatatgg gtttagcgcg ttatgccttt       600
     gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca cattcaaatg       660
     aaggccgcag cattgaaatc agcccaacct cgacttttcg ggttggacgg tggcatcagt       720
     acacaagagg agaacacaga gaggcacacc accgaggatg tctctccaag tatgcatact       780
     ctacttggag ttaagaacat g                                                 801
//