ID JQ943579; SV 1; linear; genomic RNA; STD; VRL; 3473 BP. XX AC JQ943579; XX DT 19-OCT-2012 (Rel. 114, Created) DT 19-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Le Blanc nodavirus strain JU1498 RNA-dependent RNA polymerase gene, DE complete cds. XX KW . XX OS Le Blanc nodavirus OC Viruses; Riboviria; Nodaviridae; unclassified Nodaviridae. XX RN [1] RP 1-3473 RX DOI; 10.1128/JVI.02025-12. RX PUBMED; 23043172. RA Franz C.J., Zhao G., Felix M.A., Wang D.; RT "Complete genome sequence of le blanc virus, a third caenorhabditis RT nematode-infecting virus"; RL J. Virol. 86(21):11940-11940(2012). XX RN [2] RP 1-3473 RA Franz C.J., Renshaw H.A., Wu G., Zhao G., Felix M.-A., Wang D.; RT ; RL Submitted (16-APR-2012) to the INSDC. RL Molecular Microbiology, Washington University, 4920 Parkview, St. Louis, MO RL 63110, USA XX DR MD5; 2141be540f6cdff0b77b8ee3c5d1d1eb. DR EuropePMC; PMC3486331; 23043172. DR EuropePMC; PMC4249075; 25210176. DR EuropePMC; PMC4488739; 26110586. XX FH Key Location/Qualifiers FH FT source 1..3473 FT /organism="Le Blanc nodavirus" FT /segment="RNA1" FT /host="Caenorhabditis briggsae" FT /strain="JU1498" FT /mol_type="genomic RNA" FT /country="France" FT /collected_by="Marie-Anne Felix" FT /collection_date="18-Aug-2008" FT /db_xref="taxon:1241918" FT CDS 534..3362 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:K4KA44" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:K4KA44" FT /protein_id="AFU90716.1" FT /translation="MKELYSDFLTPFQLYVVYFSELLECDFWSWFPQVKEYIDLARQMY FT RSWICHRVPEHLWTNPLIQKWECDVIVYPETWHLRRTIAAIYAFDWWFASHVFLVLLIG FT IPVYFLIHFFQTRKEFLRRDCWIGFRWWMCWLTNATVEGTRFCPSEFGGEADGYRWSTS FT SDGIITWFDGTTTSSMKRLPVANRTCLIAMLPTKIETIRTGYFIQQKWTPVGFSEPRME FT APVLATGEYLTAMETDNEITTVYCSRANTHSGAALTASTWDTVMNALKSAARDTTPYSV FT GAIVRRFYPQINKDRLSEYQSVIAAKWNAEKCPDYVLNETLPEQTLQFVGDRRDDPDAP FT WKATGRGVMPPFCTEPDTMPAKGYQAGISAVTSRLDNCRNPVRHYQQVVLTYCAEFVDR FT VVRRRIQPWTLDDVIDHQDGKLQKIRNAIAKWVAFSWLPTTEVKAMVKIESLANHNFIR FT NISTLPAEFNLSLGSYMLAAAEYMKAEFEWYGAGKTPRAIAERICDMADGAPMDEHRIQ FT WLCAADVSKMDAAKNPSLTAWLTTRIYTRLFGLEDDELITLRKAEASASAATAEGIPYN FT VGASQLSGSACTTIDNTITNAFISYVAHRIQGLTEDVSFQSLGIYVGDDSVSYNTKESV FT EEAGRVLGYKIEAEMIRETDNIPFLSRFFYDAWEGGTSSVQDPVRLLRKLHLSISPTEI FT TTQQAAANKARGIHELDPSIDFYRELYITIRRITGKTGDAMEGLGWMTRQFVSMGGWPT FT DGRANEMWDHYTSFNQSVYIDWLAGVRTWTQFMKGPSQLVFTESKRKAPIMVNPLDPTD FT QLPDEAATDDPPPPQATVGENAEDRPGASDAARMEKSAVAQIDSMVTEERRQEARAAGA FT QQPLVEEERTPAPPPAQTRRERRFGRPAPNPVPPELDPFQNMGTFRPAPARGGFNQRRW FT AARGRPRGRGGR" XX SQ Sequence 3473 BP; 852 A; 965 C; 888 G; 768 T; 0 other; tgtaaagcgc cacggcttcg ccgtttagct ttcccctttt ggttagagcg atgtctatag 60 cttgttccct tggttgcggg taacgtagtg atggcaaagt tggccaactg ggattactgg 120 cgtacgatgt aacagctgga tcgtactggg ctctgggatc gaccgtctct cttgaggatg 180 ctgcacgctt cgcgcgttag ggctagagag agcagctcgt ctagtattgt gcaatggtct 240 tgccttgcta gctaaaacca acccgaattt gatagtacgt gaacgcccgc ccattcatag 300 cgacaatgat aaactttcaa gccctaatca ctcttcttct tcgttttgtt tccttggttt 360 ttgatttggc attcttagtg cttcgttata gttttaaggc tcttatagcc cttattaggc 420 ttggttggct ccttttgcgc ctaccccttc aagtttgtct ggccgtagct cttttggctt 480 tggccgcagt gatctcatta gcaaccgccc agcataatac cagctggact gacatgaaag 540 aactctactc cgatttccta acacccttcc aactctacgt cgtgtacttc agcgaactgc 600 tagaatgtga cttttggtca tggttcccgc aggtcaaaga atacattgat ctagctcgtc 660 agatgtaccg ttcctggatc tgtcatcgag tgccagagca tctctggacc aatccactca 720 tacagaaatg ggaatgtgat gtcatcgttt atcctgaaac atggcacctt cgccggacaa 780 tagccgcaat ctacgctttt gattggtggt ttgcgtccca cgtattcctc gtcctcctga 840 taggcattcc agtttacttt ctgattcact tcttccaaac gcggaaggag tttctcagaa 900 gggactgctg gattggcttt cgatggtgga tgtgctggct taccaacgcc acagtcgaag 960 gaactaggtt ctgtccctcc gaattcgggg gcgaagcaga cggttaccga tggagcacta 1020 gctccgacgg cataatcacc tggttcgacg gaacgactac cagttcgatg aagcggcttc 1080 ccgtcgccaa ccgaacctgc ctgatagcga tgctccccac caagatagaa accatcagaa 1140 ccggatactt tatccaacag aaatggactc ccgtcggttt tagcgagcca cgcatggagg 1200 ccccggtttt ggctacgggt gaatatctga cagcaatgga gaccgacaac gaaatcacca 1260 ccgtctactg ctcaagagcc aacacgcact ctggcgccgc tctgactgct tccacttggg 1320 atacggtcat gaacgcgttg aaatctgctg cccgtgacac aacaccatac tccgtaggag 1380 caatcgtgcg cagattctac ccccagatca ataaggacag actttccgaa taccaatccg 1440 tcatcgctgc aaagtggaat gcagaaaagt gtccagacta tgtcctgaac gaaactctcc 1500 ctgaacagac tctacagttc gttggggatc gacgagatga tccggacgcg ccatggaaag 1560 ccacaggacg aggcgtcatg cctccgttct gcaccgaacc ggacaccatg ccggccaaag 1620 gctaccaagc aggaatatcg gccgtaacaa gccgattaga caattgtcgg aaccccgtcc 1680 gccactacca gcaagtcgtc ttgacgtact gtgctgagtt cgtcgatcga gtagtccgca 1740 ggcgtattca gccttggact ctcgatgacg tgattgacca ccaggacggc aaactccaga 1800 agatcaggaa cgcgatagcc aagtgggtcg ctttctcatg gctcccaact acagaagtca 1860 aagccatggt aaagatcgag tcactggcca accataattt tatccggaac atttccaccc 1920 tccccgccga attcaatttg agcctcggta gttacatgtt agctgccgca gagtacatga 1980 aggccgaatt tgaatggtac ggggcgggca agacgccaag ggccatcgcc gagcgcatat 2040 gcgatatggc tgatggagcc ccaatggatg agcaccgaat tcaatggctc tgtgccgcgg 2100 acgtctctaa gatggacgca gctaagaacc cgtcgctcac cgcttggctc acaacccgga 2160 tatacacgag gctgtttgga ttagaggacg acgagctcat cacgctcagg aaagctgaag 2220 cttcggcatc cgctgcgacg gccgagggca tcccctacaa tgtaggagct tcccaacttt 2280 caggaagcgc ctgcaccacg atcgacaaca cgatcaccaa cgcattcatc agttatgtag 2340 cacaccgtat tcaaggactt acggaagatg tcagctttca aagcttaggc atctacgtcg 2400 gagacgattc ggtgagctac aatacgaaag agtccgttga agaagcaggg agagtgctcg 2460 gctataagat cgaggcggag atgatccgtg aaacggataa catccccttc ctatccaggt 2520 ttttctatga tgcctgggaa ggtggcacca gttccgttca agacccggtc cgactattga 2580 gaaaactcca cctctctatc tcacccacag aaatcacgac gcagcaggca gctgccaaca 2640 aggcgcgagg gattcatgaa cttgacccga gtatcgattt ctaccgcgag ctctacatca 2700 caatccgacg catcaccggc aaaacgggag atgctatgga aggattgggt tggatgactc 2760 gccaatttgt gagtatggga ggttggccga cggatggacg agctaacgag atgtgggacc 2820 actacacgtc cttcaaccaa tcagtctata ttgactggtt ggctggagtc cgcacctgga 2880 cccagttcat gaaaggccca tctcagctcg tcttcacgga atccaagagg aaggcgccaa 2940 taatggtaaa ccccttggac ccaacggacc agctgccgga cgaggcagcc acggatgacc 3000 cccctccacc acaagcaacg gtaggagaga atgccgaaga taggcctgga gcgtctgacg 3060 ccgcacggat ggaaaaatcc gcagtggccc agatcgactc tatggtcacg gaggagcgcc 3120 gccaggaagc tagagctgct ggggcccaac aacccctggt ggaagaagaa cgcacaccag 3180 ctcctccccc cgctcaaaca aggcgtgagc ggcggttcgg ccgaccagcc ccgaaccctg 3240 tacctccgga actagatcct ttccagaata tgggaacgtt ccgaccggca cctgcgcgcg 3300 gtggtttcaa ccaacgccgc tgggctgccc gtggaagacc tcgaggtaga ggcggtcgct 3360 agacgtagcg tctagcataa tagtctctgt tcgacattaa atgtcagcgt tgagggaagc 3420 aacgacaaaa cggacacctg acgaggtgtc cggccccttc cccctagggg cac 3473 //