ID JQ941880; SV 1; linear; genomic RNA; STD; VRL; 7583 BP. XX AC JQ941880; XX DT 25-SEP-2012 (Rel. 114, Created) DT 14-JUL-2023 (Rel. 144, Last updated, Version 4) XX DE Bovine hungarovirus 1 strain BHUV1/2008/HUN, complete genome. XX KW . XX OS hunnivirus A1 OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Caphthovirinae; Hunnivirus; Hunnivirus A. XX RN [1] RP 1-7583 RX PUBMED; 23015712. RA Reuter G., Pankovics P., Knowles N.J., Boros A.; RT "Two closely related novel picornaviruses in cattle and sheep in hungary RT from 2008 to 2009, proposed as members of a new genus in the family RT picornaviridae"; RL J. Virol. 86(24):13295-13302(2012). XX RN [2] RP 1-7583 RA Reuter G.; RT ; RL Submitted (16-APR-2012) to the INSDC. RL Regional Laboratory of Virology, ANTSZ Baranya County Institute of State RL Public Health Sevice, Szabadsag u. 7., Pecs, Baranya H-7623, Hungary XX DR MD5; 679d5ded084eed37161ff163048eb5fd. DR EuropePMC; PMC3503094; 23015712. DR EuropePMC; PMC4403396; 25631076. DR EuropePMC; PMC4635496; 26018961. XX FH Key Location/Qualifiers FH FT source 1..7583 FT /organism="hunnivirus A1" FT /host="Bos taurus (cattle)" FT /strain="BHUV1/2008/HUN" FT /mol_type="genomic RNA" FT /country="Hungary" FT /isolation_source="fecal sample" FT /collection_date="29-Feb-2008" FT /db_xref="taxon:1233320" FT 5'UTR 1..732 FT CDS 733..7464 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:J9Y0I9" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR015031" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR037080" FT /db_xref="UniProtKB/TrEMBL:J9Y0I9" FT /protein_id="AFS33288.1" FT /translation="MVTIVVVWYSFIVAKKVFHCFQRAFHNGSFVYQTNTTAGNMEIPA FT MDFDLPSDIWNEEADFEFDVESTMLLDGQTPEDFFFEFQGPGQSKQESGNTNNSGNHGV FT INYNFYNQQWQNSVDLEHAMENNATAYGGAGGGDSTHTTNRTENLLLSGLQAVSNILPL FT LADGLTEDFENSDRVGKTQAGATTLVTQHQVGCMTYPGRKSGPSPSSAADEPTTAGPSV FT DRFITLPVGNWTQTQAVYSGWALPLPWVPLTRNTPFGALGRRHFLLNCGWHIQVQVNST FT RFHGGALGVFMVPQFVYTSQTDLTGPKPLMATDYPLFNQQQLFLFPHQILNPRTNSSVD FT IQVPYANCTPGCDPTQQAPWTLLIVVLSPLSYASGATTSLEVVASIRPLQAQFHGIRQT FT NSEFEGLPKNRNESSAFAFCSTQPHSAEPDYGAMHRSSPSFLPAEITDFLQISQIPTLT FT SIRAVSFQQAVPKQALLTMNVSLTANDLLNTSLETVSRGFAQYRGSILIRMLYTGNQMQ FT NVRYVAAYTPPGALPPADRRQTMVGIYTIYDTGLNSGSDFVIPFISTTDYRYCNAVDGL FT EVGSGGYFTIWQLTTLAVPPGSPTTAELLIFAASGKDFEWRCVASPYLALQGEDTQITP FT AETGQTPEVTAENSNQNVVPIPYAPQRISHSAVRFWYDRFFLADSLQVNYKSSGSYLHV FT LRWPDIFEKIPEVRWFMHATYCRFELEIAIRPWNQDVVDYEMVYWPPGSLLPTDTVTWV FT STADRRMRQSGPQPRWTWNTGTTPCFTARIPFTAPSSVLTQTYTGWSNTSHAEGTFGNT FT PGLNVLGALTLTQGSKNGSGTVITYISYRLVDIQMWCPRPGLYVAPPIQQSSGATNFSL FT LRLAGDVELNPGPPILSVARKLDPDLDQMFKKFEIMQESFKKLTDCAQWINVFSDIDKR FT KWFKRIMKFLSYAVILSRARHDPLLAAATAFLLSGDWLSRLCAKIVKWLPSHCRTQPPP FT FPSSDENPDDGSKDIKKESASSGFSLLVVFKNSSKPLSVNSGDIKPKTDDVPLIDLTNM FT GPKIDYPGSHNPFGESLADKLVQENERLVAEAQAEYARRSANPFEDTDVEPEKLFDKFK FT RFFSKTPKMEGPIMSEINQVLVLCRNAQWLAQQLQKILGWLGVWKQQEEDASEERFRER FT MQVYPQMMEQYEQYKNSPRHQKWNDCKTWFDEMRKLAVLHDPKLVNLFPNMASIPHENS FT RQEPILIVLRGKPGQGKSVAASMLAQMFAHSLSGKPDYYSYNSSTNYFDGYQQQPVVLI FT DDLGQDPAGTDFSVFCQMISTTPFLPNMASLNDKGIKFKSDVIIATTNLPEFKPVTIAD FT PGALQRRINFDFEVEAGQSYKTKAGTLDLAKALEPTGCSAPLHMVKADIHLFSSACLKF FT KDRMARCECSLVGVYDRVMNSHKRRNDLANKLVEIFNFQGPKEHDPRQYNDKFPVPVPR FT RKDVEKWCDLAIAQDPHDDEVLSFLRRHCDHALFGAYLRRFYGAGPDPLKPPNKYSLRK FT ALDMISIVTQVLALILMLMSLGIVIWQLFNMEGAYSGNAVVRDKKKPNGLKVIDIASLQ FT GPMNFDLEKSLLARNIVTLHCRRKDGSEFETGALAVRGRLVVMNFHLWNDATHLQLDGE FT WMPRDTIPAVRPAANGIPTELVFMNWAKTPGRQFRDITTYFPRSGEGHFKLSPAAKVTG FT ICGHMQPSFMFQAESLGTAESAKTWESVVPMVLKYKAQTAPGFCGSVVVVDNGIWKKVF FT GLHCAGAHGVGMAAIISREMVDAISQLAEFQGRIHSAKNHQYVYTPHKTQLYPTVACDD FT NTTVEPAALSPNDKRLVKPEEFKKTILAKHVGDRTDGPLAMIRGARFYARLVRAKCGQV FT NERLSLHEAVFGTDNLDPMDQTRSPGWPYIGTKRRPDLLWQTDEGLDMDPVLRAELMLM FT MEGNFSHHKFVTFLKDELRDKEKVKQGKTRVIDIASYGHAIMGRVLFGRLAAAMHAHNG FT VDLGSAVGTNPDIDWTRYAAEFKFKNFVDVDYSGFDATHSTFSFQCLKIFLQELGFDDV FT ALKYVDSLCDSTHIWDDEIFKISGGLPSGCSCTSIFNTILNNIVVRSLVPEVYDGEFQI FT LAYGDDLVLCSQEIFPVEKYKEIVEEMTNYRITPASKSGTFEWTDLSGVVFLKRYFYKD FT GLLVRPVMTYKNLHNILSWARAGTVQEKLLSVARLAQHRGEQDYKALMEPFESCGYFVP FT SFDDLELEFFSLFFG" FT mat_peptide 733..984 FT /product="L protein" FT mat_peptide 985..1227 FT /product="VP4" FT mat_peptide 1228..1944 FT /product="VP2" FT mat_peptide 1945..2613 FT /product="VP3" FT mat_peptide 2614..3318 FT /product="VP1" FT mat_peptide 3319..3381 FT /product="2A" FT mat_peptide 3382..4083 FT /product="2B" FT mat_peptide 4084..5055 FT /product="2C" FT mat_peptide 5056..5388 FT /product="3A" FT mat_peptide 5389..5469 FT /product="3B" FT mat_peptide 5470..6093 FT /product="3C" FT mat_peptide 6094..7461 FT /product="3D" FT 3'UTR 7465..7583 XX SQ Sequence 7583 BP; 2036 A; 1656 C; 1800 G; 2091 T; 0 other; tcgcccctcc tttcccccct tattttccct tttccctctc tccctccctt tgtaacttaa 60 cgtttggcaa gaaccctcac ctgtcaattg ggaccaccac tttcagtgac cccatgcgaa 120 gtagtgagag agaataagct ttcttaccct tcatttgtga acccttcagt cgaagccgct 180 tggaataaga taggaggaaa agttcattct aaatggagtg aaacatgtac ttcagaattt 240 ctagcacgcg ctgggctttc ttgcgtgtga cggcactgtc ttgccggagc tctccacact 300 gacaccccac gcttgtggac cttggtggca gatgacaaca ctgcagctgg aattgagtgt 360 ctggtacact ctgtgtaaca gtgaaaacaa tgtgatcact tcggtgagct agtagcctgt 420 ggaccaacaa ctggtaacag ttgcctcagg ggccaaaagc cacggtgttt acagcaccct 480 actggtttga ttggagcaat ccaagatgtc acagagttag taattgccaa gcagtccgta 540 ctggtatctt gacataccgt gcagttttgg atagtgaagg atgccctgac ggtacccata 600 ggtaacaagt gacactatgg atctaagcag gggctcactc tacgctgctt tacagctggc 660 tgtgagttaa aaaacgtcta gctatccaca acctagggga ctaggttttc cttttattta 720 gattacaatt atatggtgac aattgttgtt gtttggtata gcttcattgt tgctaagaag 780 gtttttcact gctttcagag agcttttcac aacggatctt ttgtttacca aacaaataca 840 acagcaggca atatggagat tccagcaatg gattttgatt tgcctagtga catctggaat 900 gaggaggccg actttgaatt tgatgttgag tcgactatgc ttttggatgg tcagacgcca 960 gaagactttt tctttgagtt tcagggacct ggacaaagta agcaggaatc tggcaacaca 1020 aacaattcag gaaaccatgg agtaataaat tacaattttt acaaccagca atggcaaaat 1080 tcagttgatt tggagcatgc catggaaaac aatgccacag cctacggagg tgctggtggt 1140 ggtgattcta cccacactac taaccgcact gaaaacctgt tgttgtctgg actccaggca 1200 gtttctaaca tcctgccgtt gctggcagac ggccttacag aagactttga gaattcagat 1260 agagtgggta agacccaggc gggtgctaca acactggtta cacaacatca ggttggatgc 1320 atgacttacc caggtcgcaa gtctggacca tcaccttcaa gtgccgctga cgagcccacc 1380 actgctgggc cgtctgttga tagatttata acattaccag ttggtaattg gacacagaca 1440 caggcagtct actctggatg ggctttgcca ctgccttggg tacccttgac tagaaacact 1500 ccttttggtg ccttgggccg taggcatttt ctgcttaatt gtgggtggca catccaagtg 1560 caagtgaatt caacacgctt tcatggtggt gctttgggtg tttttatggt gccacagttt 1620 gtttacacta gccaaactga tttgactgga ccaaaaccct tgatggcaac agattatcca 1680 cttttcaacc agcaacagtt gtttctgttt ccacaccaaa tcttgaatcc tcggactaat 1740 tcttcagtag acatacaagt tccatatgct aattgcaccc ctggctgtga tccaactcag 1800 caggcccctt ggaccctgtt gattgtggta ctgtctccct tatcatatgc cagtggagca 1860 acgacctcat tggaggtggt tgcttccata aggccacttc aggcacagtt ccatggaata 1920 aggcagacaa attctgagtt tgaaggactg ccaaagaacc gcaatgaaag ttctgcattt 1980 gccttttgtt ctacacaacc ccactctgct gagccagact atggtgccat gcaccgttcg 2040 tcaccatctt ttctgccagc agagataacg gattttctgc aaatatccca gattccaact 2100 ttgacctcaa ttcgtgcagt ttcttttcag caagcagtac caaagcaagc gctgctgact 2160 atgaatgtgt ctctaacagc aaatgacttg ttgaacacta gcttggaaac agtgtctcgg 2220 ggttttgcac agtaccgtgg cagtattctg attaggatgt tgtacactgg aaatcagatg 2280 caaaatgtga ggtatgtggc ggcatacacg ccacccggcg cactgccacc agctgaccgg 2340 cggcaaacta tggttggaat ctatacaatt tatgatactg gtttgaattc tggcagtgat 2400 tttgtgatcc ccttcatatc aacaacagat tacaggtact gcaatgctgt ggatggtctc 2460 gaagttggta gtggtggcta ttttacaatt tggcaattga ccacactggc tgtaccacct 2520 ggttccccaa caactgctga acttttgatt tttgctgctt ctggaaaaga ctttgaatgg 2580 cggtgcgtgg ccagtccata tcttgcactt cagggtgagg acacccagat aacacctgcc 2640 gaaactgggc agactcctga ggttacagct gaaaattcca accagaatgt ggtgccaatt 2700 ccatacgcac ctcagaggat ttcacatagc gctgtgcgct tttggtatga cagatttttc 2760 ttagctgaca gccttcaggt caactataag agtagcgggt catacctgca tgtgctcagg 2820 tggcctgaca tttttgagaa aatcccagaa gtgcgctggt ttatgcatgc cacctactgt 2880 agatttgaac tggaaattgc aattcgacct tggaatcagg atgtggttga ttatgagatg 2940 gtgtattggc cacctggttc attgttacca acagacactg taacatgggt ttcaacagca 3000 gatagacgca tgcgccagtc gggcccacag cctcgctgga cctggaatac tggaaccacc 3060 ccttgtttta cagctaggat accatttact gcaccttctt cagttctgac tcagacctac 3120 actggttgga gcaatacaag ccatgctgaa gggactttcg gcaacactcc gggcctgaat 3180 gtcctaggcg ctctgaccct cactcagggc tctaagaatg gtagtggtac agtgattact 3240 tacatttctt accggttggt ggatattcag atgtggtgcc cacgccctgg gctctatgtt 3300 gccccaccaa tccaacagtc ttctggtgct acaaattttt ctctcttgag gcttgcaggt 3360 gatgttgaat tgaatccagg acctccgatt cttagtgttg ctaggaaatt ggacccagat 3420 ttggatcaga tgtttaagaa atttgaaatt atgcaggaaa gttttaagaa attgactgat 3480 tgtgcccagt ggataaatgt attttctgat attgataaaa ggaaatggtt taaaaggata 3540 atgaaatttc tttcttatgc tgtgattctt tcccgtgccc ggcatgatcc cctgcttgct 3600 gcagctactg cttttcttct ttcaggtgat tggctttcac ggctgtgtgc caaaatagtt 3660 aaatggctgc cgagccactg caggacacaa ccaccacctt tcccctcttc agatgaaaac 3720 ccagatgatg gaagtaaaga tattaagaaa gaaagtgcct ctagtggctt cagcctgcta 3780 gttgtcttta aaaattcttc taaacctctt tcagtgaatt caggtgacat caaacctaaa 3840 acagatgatg tgccattgat tgatttgacc aacatggggc caaagattga ctaccccggc 3900 tcccataatc catttggaga atcactggcc gacaagctgg ttcaggaaaa tgagagatta 3960 gttgctgaag cgcaggctga gtatgcacgc cgtagtgcta atccatttga agacacggac 4020 gttgaaccag agaaattgtt tgataaattt aaaagattct tttccaaaac acctaagatg 4080 gaaggcccaa ttatgtcaga aataaatcag gtgctggtcc tctgccgcaa tgcacagtgg 4140 ctagcccagc aacttcaaaa gatcctgggc tggcttggag tttggaagca acaagaagaa 4200 gatgcctccg aggaacgctt tagggaaaga atgcaagtgt accctcagat gatggaacag 4260 tatgaacagt acaagaattc tcctagacac cagaaatgga atgactgcaa gacatggttt 4320 gatgagatgc ggaaacttgc agtattgcat gatcctaaat tagtgaattt gtttccaaac 4380 atggcaagca taccacacga gaactctaga caagagccaa ttttgattgt gctaagaggc 4440 aaaccaggcc agggcaaatc tgttgctgca agtatgctgg cacagatgtt tgcccattct 4500 ctttcaggta aaccagatta ttacagttat aattcctcaa caaattattt cgatgggtac 4560 caacagcagc ctgtcgtttt gattgacgat cttgggcaag acccagcagg gactgacttt 4620 tcagtcttct gccagatgat ttcaaccaca ccctttctac caaacatggc tagtttgaat 4680 gataaaggga tcaaatttaa gagtgatgtg atcattgcca ccactaatct tccagagttt 4740 aaaccagtaa caattgcaga tcctggagca cttcagagaa ggataaattt tgattttgaa 4800 gttgaagcag gacaatcgta taaaacaaaa gctggaacac ttgatttggc aaaagcattg 4860 gaacccacag gatgttcagc acccctccat atggtgaaag ctgacataca tttgttctct 4920 agtgcgtgct tgaagtttaa agaccgcatg gctagatgcg agtgtagttt ggttggagtc 4980 tatgataggg tgatgaactc tcacaaaaga aggaatgatt tggccaataa attagttgaa 5040 atttttaact ttcagggacc taaagaacat gacccaaggc agtacaatga caaatttcca 5100 gtgccggtgc ccagaaggaa ggatgttgaa aaatggtgtg accttgcaat tgcacaggac 5160 ccgcatgatg atgaagtttt gagctttctg aggcggcact gtgaccatgc cctatttggt 5220 gcttatttgc gccggtttta tggggctgga cctgatccgt taaagccacc aaataaatat 5280 agtttgagaa aggcattgga catgatctca attgtgaccc aagtgctggc tttgatttta 5340 atgctgatga gtcttggaat tgtgatttgg cagcttttta acatggaagg cgcatacagt 5400 ggaaacgctg ttgtgcgcga caagaagaaa cccaatggac ttaaagtgat tgacattgcc 5460 tccttacaag gaccaatgaa ttttgatctt gagaagtcac tgcttgcccg caatattgtg 5520 acactccact gtcgccgtaa ggatggcagt gagtttgaga cgggagctct tgcagtgcgt 5580 ggcaggctgg ttgtaatgaa cttccacttg tggaatgatg caacacacct gcagcttgat 5640 ggagaatgga tgccacgtga caccataccc gcagtgagac ccgctgcaaa cggcatcccc 5700 acagaacttg tcttcatgaa ctgggcaaaa accccaggaa ggcagttcag agacatcacc 5760 acttacttcc ccaggagtgg tgaaggacat tttaagctga gtccggcagc taaagtaacc 5820 ggaatttgtg gacacatgca acccagcttt atgtttcaag cagagagctt ggggactgcg 5880 gaatctgcca agacctggga gtccgtagtt ccgatggtac tgaagtataa agcccaaaca 5940 gcaccagggt tttgtggcag tgttgttgtt gttgacaacg gcatctggaa gaaagtattt 6000 ggattgcatt gtgctggagc acatggtgtt gggatggcag caattatctc gcgcgagatg 6060 gttgatgcta tttcacagct tgctgaattc caggggcgca ttcatagcgc caaaaaccac 6120 caatatgtct acacacctca taagacacaa ctgtacccca ccgttgcttg tgatgacaac 6180 actacagtgg agccagctgc acttagtcca aatgacaaga gactggtgaa accagaagag 6240 tttaaaaaga caatcctggc taaacacgtt ggtgaccgta ctgatggacc attagccatg 6300 attagaggag cccgctttta tgcacgactt gtgcgagcaa agtgtggaca ggtgaatgaa 6360 cgactgtcgc tgcacgaggc agtctttgga acagacaacc ttgacccaat ggaccagacg 6420 cgctctcctg ggtggccgta catcggtacc aagagacgcc cagacctgct ttggcagacg 6480 gatgaaggct tggacatgga tccggtgctg cgtgccgaac tgatgctcat gatggaagga 6540 aatttttccc accacaaatt tgttaccttt cttaaagatg agctcaggga caaagaaaaa 6600 gtgaaacaag gcaaaaccag agtaatagac attgcctcct acggacacgc cataatgggt 6660 cgtgtgttgt ttggccggct ggcggcagca atgcacgcac acaatggtgt ggacctgggt 6720 tcagcagtgg gaactaatcc agatattgat tggactagat atgcagcaga gttcaaattc 6780 aagaattttg ttgatgtgga ttattcggga tttgatgcaa cacactctac cttttccttt 6840 caatgcctga aaatttttct tcaggagctt ggatttgatg atgtggcctt gaaatatgtg 6900 gattctttgt gtgattcaac ccacatttgg gatgatgaga tttttaaaat ttcaggagga 6960 ttgcctagtg gttgcagctg cacaagcatt tttaacacca ttctgaataa tattgtggtg 7020 cgttcactcg tgcctgaggt gtatgatggc gagtttcaaa tactcgcata tggagatgat 7080 cttgtgcttt gttcccagga gatcttccca gttgaaaaat ataaagaaat agtggaagaa 7140 atgaccaatt atagaattac cccagcttca aagagtggaa cctttgaatg gactgacttg 7200 tctggagtgg tgtttctcaa gcgctacttc tacaaagatg gccttcttgt tcgcccggta 7260 atgacttata agaacctgca caacatcctc tcttgggcac gtgctggcac tgtccaggag 7320 aagctgttgt ccgttgcccg cttggcgcaa catcgtggcg agcaggacta caaggctctt 7380 atggaacctt ttgagtcttg tggctatttt gttcctagct ttgatgacct tgaacttgag 7440 ttcttttctc ttttctttgg ttgagttagg tgatggagtt ttctgttttg gccctaattt 7500 ggtttgagca ttaaagctga tttgattgat tgttgtgatt gagctgaatt agtaaatcag 7560 ggttaatttt ccccagagta atc 7583 //