ID JQ928346; SV 1; circular; genomic DNA; STD; VRL; 2770 BP. XX AC JQ928346; XX DT 03-OCT-2012 (Rel. 114, Created) DT 03-OCT-2012 (Rel. 114, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate 63-Birjand, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2770 RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S., RA Zaki Aghl M.; RT "Genetic diversity of TYLCV in Iran"; RL Unpublished. XX RN [2] RP 1-2770 RA Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S., RA Zaki Aghl M.; RT ; RL Submitted (11-APR-2012) to the INSDC. RL Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan RL Razavi 9177948978, Iran XX DR MD5; cdf127c3c30e069c96c2fbfa4c280d8b. XX FH Key Location/Qualifiers FH FT source 1..2770 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="63-Birjand" FT /mol_type="genomic DNA" FT /country="Iran:Birjand, South Khorasan province" FT /collected_by="Sara Gharouni Kardani" FT /collection_date="07-Jun-2010" FT /db_xref="taxon:10832" FT gene 129..479 FT /gene="V2" FT CDS 129..479 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /db_xref="GOA:K0DDV6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:K0DDV6" FT /protein_id="AFT83008.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQASIMDVQAHV FT PKAQNIQNVSKP" FT gene 289..1065 FT /gene="V1" FT CDS 289..1065 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:B4YPN4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B4YPN4" FT /protein_id="AFT83009.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1062..1466) FT /gene="C3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:K0DDV1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K0DDV1" FT /protein_id="AFT83010.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFQIWTTLRPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTESHDIKYKFY" FT gene complement(1207..1614) FT /gene="C2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="C2" FT /product="transcription activator protein" FT /db_xref="GOA:K0DG94" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K0DG94" FT /protein_id="AFT83011.1" FT /translation="MQPLSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRRETISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTPSDWSFLKSI" FT gene complement(1538..2602) FT /gene="C1" FT CDS complement(1538..2602) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:K0DH22" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K0DH22" FT /protein_id="AFT83012.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSTHFHPNIQGAKSSSDVKTYM FT EKDGDIIDHGVFQVDGRSARGGCQSANDAYAEAINTGSKAQALNILKEKAPRDFLLQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL FT FSSANQNPTPHSED" FT gene complement(2152..2445) FT /gene="C4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5ABK1" FT /protein_id="AFT83013.1" FT /translation="MGLLTCMFSSNSKESSSARTIDSSTSPPQPGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLQTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2770 BP; 748 A; 529 C; 622 G; 871 T; 0 other; accggatggc cgcgccccac gtgggtccca cacacgtcgc tatcatccaa tcaaattgat 60 gactgaaacg ttagataatt gtttatttgt ccttataaac ttagtcccca agtttgttgt 120 cttgcaatat gtgggatcca cttcttaatg aatttcctga atccgttcac ggatttcgtt 180 gtatgttagc tattaaatat ttgcaggccg ttgaggaaac gtatgagccc aacactttgg 240 gccacgattt aattagggat cttatatctg ttgtaagggc tcgtgactat gtcgaagcga 300 cccggcgata taatcatttc cacgcccgtc tcgaaggttc gccgaaggct gaacttcgac 360 agcccctaca gcagccgtgc tgctgccccc attgtccaag gcataaacaa gcgtcgatca 420 tggacgtaca ggcccatgta ccgaaagccc agaatataca gaatgtatcg aagccctgat 480 gttccccgtg gatgtgaagg cccatgtaaa gtccagtctt atgagcaaag ggatgatatt 540 aagcatactg gtattgtacg ttgtgttagt gatgttactc gtggatccgg aattacccac 600 agagtgggta agaggttctg tgttaaatcc atatattttt taggtaaagt ttggatggat 660 gaaaatatca agaagcagaa tcacactaat caggtcatgt tcttcttggt ccgtgataga 720 aggccttatg gaagcagccc aatggatttt ggacaggttt ttaatatgtt cgataatgag 780 cccagtaccg caaccgtgaa gaatgatttg cgggataggt ttcaagtgat gaggaaattt 840 catgctacag ttattggtgg gccctctgga atgaaggaac aggcattagt taagagattt 900 tttagaatta acagtcatgt aacttataat catcaagagg cagccaagta tgagaaccat 960 actgagaacg ccttgttatt gtatatggca tgtacacatg cctctaatcc agtgtatgca 1020 actatgaaaa tacgtatcta tttctatgat tcaatatcaa attaataaaa tttatatttt 1080 atatcatgac tttctgttac atttattgtg ttttcaagta catcatacaa tacatgatca 1140 actgctctga ttacattatt tatggaaatt acaccaagac tatctaaata cttaagaact 1200 tgatatctaa atactcttaa gaaacgacca gtctgagggc gtaaggtcgt ccagatttgg 1260 aagttgagat aacatttgtg aatccccagt accttcctga tgttgtgatt gaatcttatc 1320 tgtattgaaa tgatgtcgtg gctcattaga aatggtctct cgtcgtggtt ggtgatcttg 1380 aaatacaggg gattttctat ctcccatata aaaacgccat tctgggcttg atgagcagtg 1440 atgagttccc cggtgcgtga atccatgatt gatgcagttg atgtggaggt aatatgagca 1500 tccgcagtcg aggtctatgc gcttacgtct tactggctta gtcttcgcta tgcggtgttg 1560 gattttgatt ggcacttgag aacagtggct cgtagagggt gacaaaggtt gcattcttga 1620 gagcccaatt ttttaaggat atgttttttt cttcgtctag atattcccta tatgatgagg 1680 taggtcctgg attgcagagg aagatagtgg gaattccccc tttaatttga atgggcttcc 1740 cgtactttgt gttgctttgc cagtccctct gggcccccat gaattctttg aagtgcttta 1800 aataatgcgg gtctacatca tcaatgacgt tgtaccacgc atcattactg tacacctttg 1860 gacttaggtc tagatgtcca cataaataat tatgtgggcc tagagacctg gcccacattg 1920 ttttgcctgt tctgctatcc ccctcgatga caatactatt aggtctccat ggccgcgcag 1980 cggaagacat gacgttctct gacacccata cttcaagttc ctctggaact tgattaaaag 2040 aagaagataa aaatggagaa atataaggag ccggaggctc ctgaaaaatc ctatctaaat 2100 tactatttaa attatgaaat tggagtagaa agtctcttgg ggctttctcc ttcaatatat 2160 tgagggcctg agctttggac cctgtgttga ttgcctcggc atatgcgtcg tttgcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaac tccatgatca atgatgtctc 2280 cgtctttctc catgtaggtt ttgacatcgc ttgagctttt agctccctga atgttcggat 2340 ggaaatgtgt tgacctggtt ggggaggtga ggtcgaagaa tctattgttc ttgcactgga 2400 actttccttc gaattggatg agaacatgca agtgaggagt cccatcttcg tgaaactctc 2460 tgcagattct aatgaatttt ttggaagtgg gtgtttggag atttaataat tgggaaagtg 2520 cttcctcttt agtaagagag cacttgggat aagtgagaaa ataatttttg gcatttattt 2580 taaaccgatt gggggctgcc atgctggctt agtcaatcgg tgtctatcaa tttgctctat 2640 gtatcggtgt actggagtcc tatatatatg gagactttaa tggcattttg gtaatttggt 2700 aaaagtgcat tgcaattcaa aattcaaaat tcaaaaatca aatcattaaa gcggccatcc 2760 gtataatatt 2770 //