ID   JQ928340; SV 1; linear; genomic DNA; STD; VRL; 1212 BP.
XX
AC   JQ928340;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   03-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate 186-Kermanshah replication-associated
DE   protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and
DE   precoat protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1212
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   "Genetic diversity of TYLCV in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-1212
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   ;
RL   Submitted (10-APR-2012) to the INSDC.
RL   Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan
RL   Razavi 9177948978, Iran
XX
DR   MD5; 4e8524908f682ca59fa6f53d6c7abfab.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1212
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="186-Kermanshah"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Kermanshah province, Sahneh,Saraseyab
FT                   village"
FT                   /collected_by="Sara Gharouni Kardani"
FT                   /collection_date="28-Aug-2010"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..638)
FT                   /gene="C1"
FT   CDS             complement(<1..638)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:K0DAL3"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K0DAL3"
FT                   /protein_id="AFT82984.1"
FT                   /translation="MPRLFKIYAKNYFLTYPNCSLSKEAALSQLKNLETPTNKKYIKVC
FT                   RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK
FT                   DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGNKSEALNILKEKAPKDYILQFHNL
FT                   SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRP"
FT   gene            complement(194..487)
FT                   /gene="C4"
FT   CDS             complement(194..487)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDS7"
FT                   /protein_id="AFT82985.1"
FT                   /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTDQHISIRTFRQLRAQ
FT                   QMSRPTWKKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAINPRPSIY"
FT   gene            952..>1212
FT                   /gene="V2"
FT   CDS             952..>1212
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:K0DG75"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:K0DG75"
FT                   /protein_id="AFT82986.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCP"
FT   gene            1112..>1212
FT                   /gene="V1"
FT   CDS             1112..>1212
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0DH04"
FT                   /db_xref="UniProtKB/TrEMBL:K0DH04"
FT                   /protein_id="AFT82987.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVP"
XX
SQ   Sequence 1212 BP; 323 A; 242 C; 258 G; 389 T; 0 other;
     atgggtctcc atggccgcgc agcggaagac acgacgttct cagcgaccca ctcttcaagt        60
     tcatctggaa cttgattaaa agaagaagaa agaaatggag aaacataaac ttctaaagga       120
     ggactgaaaa tcctatctaa atttgaactt aaattatgaa attgtaaaat atagtccttt       180
     ggggccttct cttttaatat attgagggcc tcggatttat tgcctgaatt gagtgcttcg       240
     gcatatgcgt cgttggcaga ttgctgacct cctctagctg atctgccatc gatttggaaa       300
     actccaaaat caatgaagtc tccgtctttt tccacgtagg tcttgacatc tgttgagctc       360
     ttagctgcct gaatgttcgg atggaaatgt gctgatctgt ttggggatac caggtcgaag       420
     aaccgttggt tcttacattg gtatttgcct tcgaattgga taagcacatg gagatgtggt       480
     tccccattct cgtggagttc tctgcaaact ttgatgtatt ttttatttgt tggggtttct       540
     aggtttttta attgggaaag tgctgcctct ttagagagag aacaattggg atatgttagg       600
     aaataatttt tggcatatat tttaaataaa cgaggcatgt tgaaatgaat cggtgtccct       660
     caaatctcta tggcaatcgg tgtatcggtg tcttacttat acctggacac ctaatggcta       720
     tttggtaatt tcgcaaaagt acattgtaat tccaaattca aaattcaaaa atcaaatcat       780
     taaagcggcc atccgtataa tattaccgga tggccgtgcc ttttcctttt atgtggtccc       840
     cacgagggtt ctacaaacgt cactttcaac caatcaaatt gcatcctcaa acgttagata       900
     agttttcatt tgtctttata tacttggtcc ccaagtattt tgtcttgcaa tatgtgggac       960
     ccacttctaa atgaatttcc tgaatctgtt cacggatttc gttgtatgtt agctattaaa      1020
     tatttgcagt ccgttgagga aacttacgag cccaatacat tgggccatga tttaattagg      1080
     gatcttatat ctgttgtaag ggcccgtgac tatgtcgaag cgaccaggcg atataatcat      1140
     ttccacgccc gtctcgaagg ttcgccgaag gctgaacttc gacagcccat acagcagccg      1200
     tgctgctgtc cc                                                          1212
//