ID   JQ928339; SV 1; linear; genomic DNA; STD; VRL; 1181 BP.
XX
AC   JQ928339;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   03-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate BO replication-associated protein
DE   (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and precoat
DE   protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1181
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   "Genetic diversity of TYLCV in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-1181
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   ;
RL   Submitted (10-APR-2012) to the INSDC.
RL   Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan
RL   Razavi 9177948978, Iran
XX
DR   MD5; d15d66a32105bb01629fa81754f9d615.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1181
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="BO"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Bojnord, North Khorasan province"
FT                   /collection_date="21-Jul-2010"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..607)
FT                   /gene="C1"
FT   CDS             complement(<1..607)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:K0DDS1"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDS1"
FT                   /protein_id="AFT82980.1"
FT                   /translation="MPRLFKVNAKNYFLTYPNCSLSKEEALSQLLAINTPTNKKFIRVA
FT                   HELHEDGSPHLHVLIQFEGKYQCKNQRFFDLSSPSRSAHFHPNIQAAKSSTDVKTYVEK
FT                   DGDFIDFGIFQIDSRSARGGQQSANDAYAEALNSGRKSEALNILKEKAPKDYILQFHNL
FT                   SSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENV"
FT   gene            complement(163..471)
FT                   /gene="C4"
FT   CDS             complement(163..471)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:K0DH11"
FT                   /protein_id="AFT82981.1"
FT                   /translation="MNYMKMGLLISMFSSSSKESTNVRTNGSSIYPLQAGQHISIRTFR
FT                   QLRAQQMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPKHSIQAENPRPSIY"
FT   gene            921..>1181
FT                   /gene="V2"
FT   CDS             921..>1181
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:K0DH01"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:K0DH01"
FT                   /protein_id="AFT82982.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLVRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCP"
FT   gene            1081..>1181
FT                   /gene="V1"
FT   CDS             1081..>1181
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0DDS9"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDS9"
FT                   /protein_id="AFT82983.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVP"
XX
SQ   Sequence 1181 BP; 323 A; 237 C; 251 G; 370 T; 0 other;
     tgacgttctc tgacacccat acttcaagtt catctggaac ttgattaaaa gatgaagata        60
     aaaagggaga aatataggga gccggaggct cctgaaaaat cctatctaaa tttgaactta       120
     aattatgaaa ttgtaaaata taatcctttg gggccttctc tttcaatata ttgagggcct       180
     cggattttct gcctgaattg agtgcttcgg catatgcgtc gttggcagat tgctgacctc       240
     ctctagctga tctgctatcg atttggaaaa ttccaaaatc aatgaagtct ccgtctttct       300
     ccacgtaggt cttgacatct gttgagctct tagctgcctg aatgttcgga tggaaatgtg       360
     ctgacctgct tggagaggat aaatcgaaga accgttggtt cttacattgg tactttcctt       420
     cgaactggat gagaacatgg agatgaggag acccatcttc atgtagttca tgcgcaactc       480
     gtatgaattt cttgttagtt ggtgtattta tggcaagtaa ttgggaaagt gcttcttctt       540
     tagagagaga acaattagga taagtcagga aataattttt ggcatttact ttaaatagac       600
     gaggcatggc tacagttatc ggtgtccctc aaagctctac agcaatcggt gtatccggag       660
     tcttatttat acctagacac caatggctat ttggtaattt cgtaaaagta taatgtaatt       720
     caaatttcaa aattcaaaaa tcaaatcatt aaagcggcca tccgtataat attaccggat       780
     ggccgcgcct tttcttttta tgtggtcccc acgagtgttc cgcatacgtc actgtcaacc       840
     aattaaattg catcctcaaa cgttagataa gtgttcagtt gtctatatat acttggtccc       900
     caagtatttt gtcttgcaat atgtgggacc cacttctaaa tgaatttcct gaatctgttc       960
     acggatttcg ttgtatgtta gctattaaat atttgcagtc cgttgaggaa acttacgagc      1020
     ccaatacatt gggccacgat ttagttaggg atcttatatc tgttgtaagg gcccgtgact      1080
     atgtcgaagc gaccaggcga tataatcatt tccacgcccg tctcgaaggt tcgccgaagg      1140
     ctgaacttcg acagcccata cagcagccgt gctgctgtcc c                          1181
//