ID   JQ928338; SV 1; linear; genomic DNA; STD; VRL; 1178 BP.
XX
AC   JQ928338;
XX
DT   03-OCT-2012 (Rel. 114, Created)
DT   03-OCT-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus isolate 125-Dargaz replication-associated
DE   protein (C1) gene, partial cds; C4 protein (C4) gene, complete cds; and
DE   precoat protein (V2) and coat protein (V1) genes, partial cds.
XX
KW   .
XX
OS   Tomato yellow leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1178
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   "Genetic diversity of TYLCV in Iran";
RL   Unpublished.
XX
RN   [2]
RP   1-1178
RA   Gharouni Kardani S., Jafarpour B., Mehrvar M., Heydarnejad J., Tarighi S.,
RA   Zaki Aghl M.;
RT   ;
RL   Submitted (10-APR-2012) to the INSDC.
RL   Plant Protection, Ferdowsi University, Azadi Square, Mashhad, Khorasan
RL   Razavi 9177948978, Iran
XX
DR   MD5; 85818e8c94089406ddcfa66502d646f5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1178
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="125-Dargaz"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Dargaz, Khorasan Razavi"
FT                   /collected_by="Sara Gharouni Kardani"
FT                   /collection_date="03-Jul-2010"
FT                   /db_xref="taxon:10832"
FT   gene            complement(<1..607)
FT                   /gene="C1"
FT   CDS             complement(<1..607)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:K0DG68"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K0DG68"
FT                   /protein_id="AFT82976.1"
FT                   /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLLALNTPTNKKFIRVA
FT                   HELHEDGSPHLHVLIQFEGKYQCKNQRFFDLSSPSRSAHFHPNIQAAKSSTDVKTYVEK
FT                   DGDFIDFGIFQIDGRSARGGQQSANDAYAEALNSGRKSEALNILKEKAPKDYILQFHNL
FT                   SSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENV"
FT   gene            complement(163..471)
FT                   /gene="C4"
FT   CDS             complement(163..471)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:I1VX08"
FT                   /protein_id="AFT82977.1"
FT                   /translation="MNYMKMGLLISMFSSSSKESTSVRTNDSSIYPLQAGQHISIRTFR
FT                   QLRAQQMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAENPRPSIY"
FT   gene            919..>1178
FT                   /gene="V2"
FT   CDS             919..>1178
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:K0DDS2"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:K0DDS2"
FT                   /protein_id="AFT82978.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLVRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCFP"
FT   gene            1079..>1178
FT                   /gene="V1"
FT   CDS             1079..>1178
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0DAK5"
FT                   /db_xref="UniProtKB/TrEMBL:K0DAK5"
FT                   /protein_id="AFT82979.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAS"
XX
SQ   Sequence 1178 BP; 328 A; 233 C; 251 G; 366 T; 0 other;
     tgacgttctc tgacacccat acttcaagtt catctggaac ttgattaaaa gatgaagata        60
     aaaagggaga aatataagga gccggaggct cttgaaaaat cctatctaaa tttgaactta       120
     aattatgaaa ttgtaaaata taatcctttg gggccttctc tttcaatata ttgagggcct       180
     cggattttct gcctgaattg agtgcttcgg catatgcgtc gttggcagat tgctgacctc       240
     ctctagctga tctgccatcg atttggaaaa ttccaaaatc aatgaagtct ccgtctttct       300
     ccacgtaggt cttgacatct gttgagctct tagctgcctg aatgttcgga tggaaatgtg       360
     ctgacctgct tggagaggat aaatcgaaga atcgttggtt cttacactgg tactttcctt       420
     cgaactggat gagaacatgg agatgaggag acccatcttc atgtagttca tgcgcaactc       480
     gtatgaattt cttgttagtt ggtgtattta gggcaagtaa ttgggaaagt gcttcttctt       540
     tagagagaga acaattagga taagtcagga aataattttt ggcatatatt ttaaatagac       600
     gaggcatggt gaaatgaatc ggtgtccctc aaaactctat ggcaatcggt gtatccggtg       660
     tcttacttat acctagacac ccaatggcta tttggtaatt tcgtaaaagt aaatgtaatt       720
     caaaattcaa aattcaaaaa tcaaatcatt aaagcggcca tccgtataat attaccggat       780
     ggccgcgctt tttttttatg tggtccccac gagtgttccg cagacgtcac tgtcaaccaa       840
     tcaaattgca tcctcaaacg ttagataagt attgatttgt ctatatatac ttggtcccca       900
     agtattttgt cttgcaatat gtgggaccca cttctaaatg aatttcctga atctgttcac       960
     ggatttcgtt gtatgttagc tattaaatat ttgcagtccg ttgaggaaac ttacgagccc      1020
     aatacattgg gccacgattt agttagggat cttatatctg ttgtaagggc ccgtgactat      1080
     gtcgaagcga ccaggcgata taatcatttc cacgcccgtc tcgaaggttc gccgaaggct      1140
     gaacttcgac agcccataca gcagccgtgc tgcttccc                              1178
//