ID JQ927425; SV 1; linear; genomic RNA; STD; VRL; 2473 BP. XX AC JQ927425; XX DT 03-JUL-2012 (Rel. 113, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Rice stripe virus isolate SuZ10 segment 3, complete sequence. XX KW . XX OS Tenuivirus oryzaclavatae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2473 RA Huang L., Rao L., Wu J.; RT "Genetic variability and evolution of Rice stripe virus"; RL Unpublished. XX RN [2] RP 1-2473 RA Huang L., Rao L., Wu J.; RT ; RL Submitted (16-APR-2012) to the INSDC. RL State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang RL University, Hangzhou, Zhejiang 310058, China XX DR MD5; 689c87d38ba7783deea2195e1dfac24d. XX CC GenBank Accession Numbers JQ927419, JQ927425, JQ927431, JQ927437 CC represent the complete genome of Rice stripe virus isolate SuZ10. CC CC ##Assembly-Data-START## CC Assembly Method :: SeqMan II v. 5.01 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2473 FT /organism="Tenuivirus oryzaclavatae" FT /segment="3" FT /host="rice" FT /isolate="SuZ10" FT /mol_type="genomic RNA" FT /country="China: Suzhou Province" FT /collection_date="25-Jul-2010" FT /db_xref="taxon:3052763" FT CDS 66..701 FT /codon_start=1 FT /product="NS3 protein" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:O10387" FT /protein_id="AFM93788.1" FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL" FT CDS complement(1413..2381) FT /codon_start=1 FT /product="CP" FT /db_xref="GOA:Q8JRD1" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q8JRD1" FT /protein_id="AFM93789.1" FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD" XX SQ Sequence 2473 BP; 754 A; 531 C; 430 G; 758 T; 0 other; acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc cgacatcatc 60 taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga atttgatcat cctctgcttt 120 tggagaatga tctgaccagt ttgagcataa actgtgatga tgtccattgt tcttcaagag 180 ccttatgtta tatatatgac attcattcat ctaggcaccc ttccattgat gagcatcagt 240 ttctgaggct tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc 300 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt cctactataa 360 tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa gcctagaccc ccatcaacaa 420 attgctggac atgcagaatg tccaaagaca atttgccctt caccgttcct agtgtcaagg 480 gatttcctcc agatgcagag ctctacattg tgccaatatc tgaccatgat ggaaagcctg 540 tcaaatttga caataggaag actctatata gatcacctag taagaaaagg cataagtatg 600 tcatttcttc tgataaacca cctcttagtg cacgttatgt taaatacgtt gattctagtg 660 cactagaacc ctcaccaggc agctctccag ctgtgctgta gaaataaaaa gaaaaaagga 720 aaaagaaaat aaaacaaata ataaaaaaca caaaaaaatc ttaaaaatga aaaacacaaa 780 aaagccaaaa aactaaaaaa actgaaaaac atcatgacct aaaaactgca caccactggt 840 tgtctagtgg gctctagttg gtagagaaag ctatgctttt gcctaaagcc atgattggcc 900 aatccctaaa atgtgctaag cacattatcc gaagatgtct cggatgtttt tttacctaac 960 ctaatttttt tgtattttta tataattttt tgattttttt gtttttatat acatattttt 1020 gttttttgat ttttttgttt tttaatattt tttcttctaa ttactacatt aatatatttg 1080 attattcata tacttaaaat atatagtatg cattataaaa atagagcaat ataataaagc 1140 tagtataact acatcacaaa catatatcta aatatttaga tagacttatc aaactaaaga 1200 ctctactaga gagtgagtaa taataatggc aatacatcac acacaaagcc caaaaccaca 1260 cggacaaaat aacttatgga atataattta aaactaaaat atacacatat aaatatacat 1320 attgacttac acctaaagaa acaacacact gtttgaagac atgcatcttc cagggagaca 1380 tgagatcccc cacaactact gacttgctca gtctagtcat ctgcaccttc tgcctcgtcc 1440 tcgaagaact ccttcaccaa cccgctgact tcagatgctg tctttgaagt gttctcagca 1500 aggatcttca tcagtttgct ctgttgagcc aagtacagcc ttgtctgatt cccataagtg 1560 ctgatcgtat tgacagacat accagccagc gcatcgaaaa ttgtggtctt cactttccca 1620 ttggtgatga actcatctaa gaccttcttt ctgccatctt ccttcttctt gtcagccagg 1680 ttctttgact tgcatgtgat gaccaggaga ccagttgtgt acttcatcat gtctatgtct 1740 tttgtcagac cacgctcctt cttcttaccc tctggcatgg tctttttggt tatttggaag 1800 gagtgaatga tgtgcacaac aaacaaaatg tgacttaggg agtgagttgt gcagtaagga 1860 gctgtttcac tctccagttt gatatattgt ggaacatagt cccacagtaa gttgtcacat 1920 cctgttaatc ccaggtcgga ggagtccaca gccatcttaa caccagaaat ttgtctcaca 1980 acttcatgtg agacatttgg gaatagctga gccagccttc caagtgtgat agcattggca 2040 tttgtcccca ccgaagacac tatcccatac ctcgacacca aggtcgaagc ctctgtgctt 2100 ccagccgcca ctttcacttt cttagtgaca tctctcacaa agccagtgcc tctcacatat 2160 ctcatggtga tgcacatagt catatccttg gccagtgtgt caccaccttt gtccttcaat 2220 atgccaatca gagttgcagc atcatagcct gcatactcta tctgaccagc aaaggtcaca 2280 acatcagctt tatgagcagt caggtaagac aatgcatctt tggagatgtc attgattgcc 2340 ttctgcaaat cagctagagt ggctggcttg ttggtgccca ttgtagcaag aggtactgga 2400 ggaatggttg cggcttagat gaaatttgga atgtaaaagc aaaatcgaaa attttattac 2460 ccagactttg tgt 2473 //