ID   JQ927418; SV 1; linear; genomic RNA; STD; VRL; 2138 BP.
XX
AC   JQ927418;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate LiaoN08 segment 4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2138
RA   Huang L., Rao L., Wu J.;
RT   "Genetic variability and evolution of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2138
RA   Huang L., Rao L., Wu J.;
RT   ;
RL   Submitted (16-APR-2012) to the INSDC.
RL   State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang
RL   University, Hangzhou, Zhejiang 310058, China
XX
DR   MD5; 69cb9e57fd9e06782a1264b7a4c8b4ae.
XX
CC   GenBank Accession Numbers JQ927418, JQ927424, JQ927430, JQ927436
CC   represent the complete genome of Rice stripe virus isolate LiaoN08.
CC   
CC   ##Assembly-Data-START##
CC   Assembly Method       :: SeqMan II v. 5.01
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2138
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="4"
FT                   /host="rice"
FT                   /isolate="LiaoN08"
FT                   /mol_type="genomic RNA"
FT                   /country="China: Liaoning Province"
FT                   /collection_date="01-Jul-2008"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="SP protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:Q52R49"
FT                   /protein_id="AFM93793.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1227..2087)
FT                   /codon_start=1
FT                   /product="MP"
FT                   /db_xref="GOA:B5B661"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:B5B661"
FT                   /protein_id="AFM93794.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRRATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2138 BP; 681 A; 446 C; 399 G; 612 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca agggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc tcacctttta ggaggtgaag atgatgacaa tgctctcata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaagaat       420
     tttcttagac accctaatag gatgtctaag gaccagatta aattgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc aattatccaa cctcttctac acaagacata gtttattgca       600
     tatcacattt tccaccaacg agagcttgca ctctaggagt gaagccagtt tgggttgacc       660
     ttcttgtctg aaaatacaag tatattatag tctaaacaat atacatgatg tttgtttact       720
     tatgcttaac agtttgtaaa taattgtgtg tgattgagcg tgtgtgtata tatgtattaa       780
     tatataactg tacacaggtg tgcagatgca aacacctgaa acaaataaac aaatatatac       840
     ctatcaaatc atatacatgc ttgtgagtct tggctcctct gcatacacac atacaagaac       900
     cattgcaaaa atactaataa ctttgctatt acaatatcaa aaccaaaaac tgaaatacca       960
     aaaacatgag aaaatagaaa atcaaaaaca atgaatggtg ctaagcacca catccggatg      1020
     tggtgcgtag caccattttc ataacattag tctataacct acttgtggca aaaacaccca      1080
     tatgcataaa gtgcatagca ctctcttatg gattgaccac tataattacg tgaatgcata      1140
     gcattctctt gaaaaaacag agcagaacag accacatcaa gtgcgtagca ctagatgcta      1200
     gcatactctg gaactggttc tctcacctac atgatgacag aaacttcaga ttttgatttc      1260
     tttgtgatgg gtatcttctt tggctgcttc accacaccga actccttctc agtgtctagc      1320
     tcagggaagc ttttgctggt gaaagcacct ccaacagctt tctgaacaac attagtcgtg      1380
     aaattactga agctggacaa atggtttatt gccttatctt ctagtggttc aaattcaaac      1440
     atcacagtgt cattggtctt catggacact ggcagatcag tcctttcaat cccccagaac      1500
     caaagagttc tagagatgac acagttctgc actgagctgt catcaacaga tacggacact      1560
     tgaagattat gcttatcttc caaagccaga aaattcgcta gagaacccaa gacagcaaaa      1620
     ttcttactaa ttgggtagcg aacctctacc tcaacttgat ctgaggagtt cacataggac      1680
     ttgtctatta tgcggagggt agttattcca ctagctctac ccttgattcc aatccagacc      1740
     atagcaaaag ttgccactct gaagaatgga taatgggtga gaggttgatg aaaccaatat      1800
     ggatcaacaa gtatgttgaa agttgctctc ctatgggcct tcacagaata gtcctgtttg      1860
     gctatgaaca tatcatactt gttcaccttg acatctgaga agctgaaggg ttccaatcca      1920
     agcattgtgg cagcttggtc aatcgtaacc ctaccctggt tcagaggcct cttggagaga      1980
     gctaaagatt tcctattctt attatcaact ctcttttggg actcctcact aaggtcatca      2040
     tagagtacct tactttttga agtggacaaa agtcgagaca aagccataat taaagtatat      2100
     attagcttaa tctcaaaaga tatgccctga ctttgtgt                              2138
//