ID   JQ927417; SV 1; linear; genomic RNA; STD; VRL; 2239 BP.
XX
AC   JQ927417;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate KunM08 segment 4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2239
RA   Huang L., Rao L., Wu J.;
RT   "Genetic variability and evolution of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2239
RA   Huang L., Rao L., Wu J.;
RT   ;
RL   Submitted (16-APR-2012) to the INSDC.
RL   State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang
RL   University, Hangzhou, Zhejiang 310058, China
XX
DR   MD5; 26a490c2141c191de3bfbca75b435ddb.
XX
CC   GenBank Accession Numbers JQ927417, JQ927423, JQ927429, JQ927435
CC   represent the complete genome of Rice stripe virus isolate KunM08.
CC   
CC   ##Assembly-Data-START##
CC   Assembly Method       :: SeqMan II v. 5.01
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2239
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="4"
FT                   /host="rice"
FT                   /isolate="KunM08"
FT                   /mol_type="genomic RNA"
FT                   /country="China: Yunnan Province"
FT                   /collection_date="01-Jul-2008"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="SP protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:O10389"
FT                   /protein_id="AFM93800.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNILQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1328..2188)
FT                   /codon_start=1
FT                   /product="MP"
FT                   /db_xref="GOA:I6U4S4"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:I6U4S4"
FT                   /protein_id="AFM93801.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKNNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITRKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2239 BP; 704 A; 468 C; 429 G; 638 T; 0 other;
     acacaaagtc cagggcattt gtgcaacgat ccaccaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactctg       120
     ttgtatgaca ctctgcccga gactgttagc gataatatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctgatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctc ttcattaaag ttcacaaaca tataccagag       300
     ttttgccact cattcctatc acaccttcta ggaggtgaag atgatgacaa tgctctaata       360
     gacattggtc tgttcttcaa catcttgcaa ccctctttgg gaggttggat aactaagaat       420
     tttcttaggc accctaatag gatgtccaag gaccagatta aaatgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc tatcattcaa cctcttctac acaaaacata gttcattgtg       600
     tatcatgtag tctcacctat gagtgcttgc aatctagaag tgaagccagt ctgggttgac       660
     ctgctagtat agaaatataa gtatattgta ttctacataa tataatatct atgatgtttg       720
     ttcacttaag cttggtaact tgtaagtaat tgtgtgtggt tgtgcatgta tatatatgtc       780
     aacttataac tgtgcatggg tatgtagatg tggacacttt ggaataaata tatacctatc       840
     aaattatata cacacttgta agtccttgtt cctctataca cacacatgga gacatgagag       900
     cgtcaagtag cacagtcctg gagctatagg cacaggtgta gttgtgtggt tagaactctc       960
     aaggctaaga attctccaac atcaccctat acaaaaacca ttacaaaaat actaaaacct      1020
     caattccact atgcaaaaac caaaaaactg acatgcaaaa aacatgagaa aacagaaaat      1080
     caaaaacaac gaatggtgct agtcaccaca tccggatgtg gtgcgtagca ccattttcat      1140
     agtattaacc tataatctat ttgtaacatg aacacccata tgcatgaagt gcatagcact      1200
     ctcatatgga ttgactgcta tgatcgcatg aatgcatagc attctcatag gaagaaagca      1260
     gagcagaaca gaccacatca agtgcttagc accagatgtt agcatattct gaagctggcc      1320
     atctcaccta catgatgaca gaaacttcag attttgattt cctcgtgatg ggtatcttct      1380
     ttggctgctt caccacaccg aactccttct cagtgtctag ctcagggaag ctcttgctgg      1440
     tgaatgcacc tccaacagct ttctgaacaa cattagttgt gaaattactg aagctagaca      1500
     aatgatttat tgccttatct tctagtggtt caaattcaaa catcacagtg tcactggtct      1560
     tcatggacac tggcagatca gtcctttcaa tcccccagaa ccagagagtt ctagagatga      1620
     cacagttctg cactgagctg tcatcaacag acacagacac ctgaagatta ttcttatcct      1680
     ccaaagccag aaagtttgct agagaaccca agacagcaaa gttcttgcta attgggtagc      1740
     gaacctctac ctcaacttga tctgaggggt tcacataaga cttatctata atgcggaggg      1800
     tagtaattcc actggctcta ccttttatcc caatccagac catagcaaaa gttgctactc      1860
     tgaaaaatgg ataatgggtg agaggttgat gaaaccaata tggatcaaca agtatattga      1920
     aagttgcttt cctatgggcc ttcacagaat agtcctgttt agctatgaac atatcatact      1980
     tgttcacctt gacatctgag aagctgaagg gttctaatcc gagcattgta gctgcctggt      2040
     caatcgtaac cctaccttgg ttcagaggcc tcttggagag agctagagat ttcctattct      2100
     tattatcaac tctcttttga gactcctcac taaggtcatc atagagtacc ttactttttg      2160
     aagtggacaa gagtcgagac agagccatga ttaaattata tattagctta atctcaaaag      2220
     atatgccctg actttgtgt                                                   2239
//