ID   JQ927416; SV 1; linear; genomic RNA; STD; VRL; 2139 BP.
XX
AC   JQ927416;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate JiangY10 segment 4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2139
RA   Huang L., Rao L., Wu J.;
RT   "Genetic variability and evolution of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2139
RA   Huang L., Rao L., Wu J.;
RT   ;
RL   Submitted (16-APR-2012) to the INSDC.
RL   State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang
RL   University, Hangzhou, Zhejiang 310058, China
XX
DR   MD5; 907b4c217f54c4a0c443516d4d75f652.
XX
CC   GenBank Accession Numbers JQ927416, JQ927422, JQ927428, JQ927434
CC   represent the complete genome of Rice stripe virus isolate
CC   JiangY10.
CC   
CC   ##Assembly-Data-START##
CC   Assembly Method       :: SeqMan II v. 5.01
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2139
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="4"
FT                   /host="rice"
FT                   /isolate="JiangY10"
FT                   /mol_type="genomic RNA"
FT                   /country="China: Suzhou Province"
FT                   /collection_date="25-Jul-2010"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="SP protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:I6TLQ9"
FT                   /protein_id="AFM93807.1"
FT                   /translation="MQDVQRTVEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITRNFLRHPNRMSKDQIKLLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1228..2088)
FT                   /codon_start=1
FT                   /product="MP"
FT                   /db_xref="GOA:B5B661"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:B5B661"
FT                   /protein_id="AFM93808.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRRATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNSSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTNDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITKKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2139 BP; 678 A; 446 C; 407 G; 608 T; 0 other;
     acacaaagtc cagggcattt gtgcaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacagtaga agtttctgtt ggtcctattg taggcctaga ttacactcta       120
     ttgtatgaca ctctgcccga gactgttagc gataacatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctaatactca aaggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctt ttcatcaaag ttcacaaaca tataccagag       300
     ttttgtcact cattcctatc acacctttta ggaggcgaag atgatgacaa tgctctcata       360
     gacattggtc tgtttttcaa catgttgcaa ccctctttgg gcggttggat aaccaggaat       420
     tttcttagac accctaatag gatgtctaag gaccagatta aattgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc gattatccaa cctcttctac acaagacata gtttattgca       600
     tatcacattt tccaccaacg agagcttgca ctctagaagt ggagccagtt tgggttgacc       660
     ttcttgtatg aaaatacaag tatattatag tctaaacaaa atacatgatg tttgtttact       720
     taagcttaac agtttgtaaa taattgtgtg tgattgagcg tgtgtgtata tatgtattaa       780
     tatataactg tacacaggtg tgcagatgca aacacctgaa acaaataaac aaatatatac       840
     ctatcaaatc atatacatgc ttgtgagtct tggctcctct acatacacgc atacaagaac       900
     cattgtaaaa atattaacaa ccttgctttt acaatatcaa aaccaaaaac tgaaatacca       960
     aaaacatgag aaaatagaaa atcaaaaaca atgaatggtg ctaagcacca tatccggatg      1020
     tggtgcgtag caccattttc ataacattag tctataacct acttgtggca aaaacaccca      1080
     tatgcatgaa gtgcatagca ctctcttatg gattgaccac tataatcacg tgaatgcata      1140
     gcattctctt ggaaaaagca gagcagaaca gaccacatca agtgcgtagc actagatgct      1200
     agcatactct ggaactggtt atctcatcta catgatgaca gaaacttcag attttgattt      1260
     ctttgtgatg ggtatcttct ttggctgctt caccacaccg aactccttct cagtgtctag      1320
     ctcagggaag ctcttgctgg tgaaagcacc tccaacagct ttctgaacaa cattagtcgt      1380
     gaaattactg aagctggaca aatggtttat tgccttatct tctagtggtt caaattcaaa      1440
     catcacagtg tcattggtct tcatggacac tggcagatca gtcctttcaa tcccccagaa      1500
     ccaaagagtt ctagagatga cacagttctg cactgagctg tcatcaacag atacggacac      1560
     ttgaagatta tgcttatcct ccaaagccag aaaattcgct agagaaccca agacagcaaa      1620
     attcttgctg attgggtagc gaacctctac ctcaacttga tctgaggagt tcacatagga      1680
     cttgtctatt atgcggaggg tagttattcc actggctcta cccttgattc caatccagac      1740
     catagcaaaa gttgccactc taaagaatgg ataatgggtg agaggttgat gaaaccaata      1800
     tggatcaaca agtatgttga aagttgctct cctatgggcc ttcacagaat agtcctgttt      1860
     ggctatgaac atatcatact tgttcacctt gacatctgag aagctgaagg gttccaatcc      1920
     aagcattgtg gcagcttggt cgatcgtaac cctaccctgg ttcagaggcc tcttggagag      1980
     agctaaagat ttcctattct tattatcaac tctcttttgg gactcctcac taaggtcatc      2040
     atagagtacc ttactttttg aagtggacaa aagtcgagac aaagccataa ttaaagtata      2100
     tattagctta atctcaaaag atatgccctg actttgtgt                             2139
//