ID   JQ927414; SV 1; linear; genomic RNA; STD; VRL; 2240 BP.
XX
AC   JQ927414;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Rice stripe virus isolate DaL08 segment 4, complete sequence.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-2240
RA   Huang L., Rao L., Wu J.;
RT   "Genetic variability and evolution of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2240
RA   Huang L., Rao L., Wu J.;
RT   ;
RL   Submitted (16-APR-2012) to the INSDC.
RL   State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang
RL   University, Hangzhou, Zhejiang 310058, China
XX
DR   MD5; 287f9e2f474349ab32de54317321f6ba.
XX
CC   GenBank Accession Numbers JQ927414, JQ927420, JQ927426, JQ927432
CC   represent the complete genome of Rice stripe virus isolate DaL08.
CC   
CC   ##Assembly-Data-START##
CC   Assembly Method       :: SeqMan II v. 5.01
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2240
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="4"
FT                   /host="rice"
FT                   /isolate="DaL08"
FT                   /mol_type="genomic RNA"
FT                   /country="China: Yunnan Province"
FT                   /collection_date="01-Jul-2008"
FT                   /db_xref="taxon:3052763"
FT   CDS             55..591
FT                   /codon_start=1
FT                   /product="SP protein"
FT                   /db_xref="InterPro:IPR006960"
FT                   /db_xref="UniProtKB/TrEMBL:O10389"
FT                   /protein_id="AFM93821.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNILQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1329..2189)
FT                   /codon_start=1
FT                   /product="MP"
FT                   /db_xref="GOA:B7VCB5"
FT                   /db_xref="InterPro:IPR004980"
FT                   /db_xref="UniProtKB/TrEMBL:B7VCB5"
FT                   /protein_id="AFM93822.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWRIERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITRKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2240 BP; 715 A; 458 C; 425 G; 642 T; 0 other;
     acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc gaagatgcaa        60
     gacgtacaaa ggacaataga agtttctgtt ggtcctattg taggcctaga ttacactctg       120
     ttgtatgaca ctctaccaga gactgttagc gataatatta ctctacctga tttgaaagat       180
     ccagagagag tcacggaaga tactaagaag ctgatactca agggctgtgt ttacatagca       240
     tatcatcacc ccttggagac tgacaccctc ttcattaaag ttcacaaaca tataccagag       300
     ttttgccact cattcctatc acaccttcta ggaggtgaag atgatgacaa tgctctaata       360
     gacattggtc tgttcttcaa catcttgcaa ccctctttgg gaggttggat aacaaagaat       420
     tttcttaggc accctaatag gatgtccaag gaccaaatca aaatgctcct ggatcagatt       480
     atcaagatgg ctaaggctga gagctcagac acagaagagt atgagaaagt gtggaagaag       540
     atgccaactt attttgaatc tatcattcaa cctcttctac acaaaacata gttcattgtg       600
     tatcatgtag tctcacctaa gagtgattgc aatctagaag tgaagccagt ctgggttgac       660
     ttactagtat agaaatataa atatattgta gtctacataa catataatat atatgatgtt       720
     tgttcactta agcttgataa tttataagta attgtgtgtg attgtgcgtg tatatatatg       780
     tcaacttata actgtgcata ggtatgtaga tgtggacact tggaataaat atatacctat       840
     caacttatat acacatttgt aagtccttgt tcctctatat acacacatgg agacacgaga       900
     gtgtcaagta gcacagtcct ggggctattg gcacaggtat agttttgtgg ttagaactct       960
     caaggctaag aattctctaa catcgcttta tacaaaaacc attacaaaaa tactaaaacc      1020
     tcaattccac aatgcaaaaa ccaaaaaact gaaatgccaa aaacatgaga aaatagaaaa      1080
     tcaaaaacaa cgaatggtgc taggcaccac atccggatgt ggtgcgtagc accattttca      1140
     tagtattaac ctataatcta tttgtggcat gaacacccat atgcatgaag tgcatagcac      1200
     tctcatatgg attgactgct atgattacat gaatgcatag cattctcata ggaaaaaagc      1260
     aaagtagaac agaccacatc aagtgcttag caccagatgt tagcatattc cgaatcttgc      1320
     catctcacct acatgattac agaaacttca gattttgatt tcctcgtgat gggtatcttc      1380
     tttggctgct tcaccacacc gaactccttt tcagtgtcta gctcagggaa gctcttgctg      1440
     gtgaatgcac ctccaacagc tttctgaaca acattagttg tgaaattact gaagctagac      1500
     aaatgattta ttgccttatc ttctagtggt tcaaattcaa acatcacagt gtcactggtc      1560
     ttcatggaca ctggcagatc agtcctttca atcctccaga accaaagagt tctagagatg      1620
     acacagttct gcactgagct gtcatcaaca gacacggaca cctgaagatt atgcttatcc      1680
     tccaaagcca gaaagtttgc tagagaacct aagacagcaa agttcttgct aattgggtag      1740
     cgaacctcta cctcaacttg atctgagggg ttcacataag acttatctat aatgcggaga      1800
     gtagtaattc cactggctct accctttatc ccaatccaga ccatagcaaa agttgctact      1860
     ctgaaaaatg gataatgggt gagaggctga tgaaaccaat atggatcaac aagtatgttg      1920
     aaagttgctt tcctatgggc cttcacagaa tagtcctgtt tagctatgaa catatcatac      1980
     ttgttcacct tgacatctga gaagctgaag ggttccaatc cgagcattgt agcagcctgg      2040
     tcaatcgtaa cccgaccttg gttcagaggc ctcttggaga gagctagaga tttcctattc      2100
     ttattatcaa ctctcttttg agactcctca ctaaggtcgt catagagtac cttacttttt      2160
     gaagtggaca agagtcgaga cagagccatg attaaattgt atattagctt aatctcaaaa      2220
     gatatgccct gactttgtgt                                                  2240
//