ID JQ897969; SV 1; circular; genomic DNA; STD; VRL; 2735 BP. XX AC JQ897969; XX DT 29-APR-2012 (Rel. 112, Created) DT 20-NOV-2017 (Rel. 134, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus 2, complete genome. XX KW . XX OS Tomato leaf curl New Delhi virus 2 OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2735 RA Chaudhary A., Kumar R., Mukherjee S.K.; RT "Tomato Leaf Curl New Delhi [IAND] Virus"; RL Unpublished. XX RN [2] RP 1-2735 RA Chaudhary A., Kumar R., Mukherjee S.K.; RT ; RL Submitted (03-APR-2012) to the INSDC. RL Plant Molecular Biology, ICGEB, Aruna Asaf Ali Marg, New Delhi, New Delhi RL 110067, India XX DR MD5; a8e90ef266a644d74fda52a6038c3987. DR EuropePMC; PMC5127021; 27834936. XX FH Key Location/Qualifiers FH FT source 1..2735 FT /organism="Tomato leaf curl New Delhi virus 2" FT /host="Solanum lycopersicum" FT /isolate="ToLCVIANDS1.1-A" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaf tissue" FT /collected_by="Rakesh Kumar" FT /collection_date="12-Sep-2011" FT /identified_by="Ajeet Chaudhary" FT /db_xref="taxon:2050583" FT gene 116..463 FT /gene="AV2" FT CDS 116..463 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:I1V8L9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:I1V8L9" FT /protein_id="AFI38968.1" FT /translation="MWDPLVNEFPETVHGFRCMLAIKYLQLLSQEYSPDTVGYDLIRDL FT ICILRSRNYVEASCRYRHFYPRVEGASASELRQPVRDPCGCPHCPRHKIANVGEQAHES FT EAQNLQDVQKP" FT gene 276..1046 FT /gene="AV1" FT CDS 276..1046 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /db_xref="GOA:I1V8L8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I1V8L8" FT /protein_id="AFI38967.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRVAVPTVRVTKSRMWA FT NRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLARDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1060..1452) FT /gene="AC3" FT CDS complement(1060..1452) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:I1V8L4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I1V8L4" FT /protein_id="AFI38963.1" FT /translation="MDSRTGEPITAAQAWNGAYIWEIPNPLYFKLLSHDVRPFTTNMDI FT LTIRIQFNYNLRRALGVHKCFLTYRIWTTLHPPTGLFLRVFKTQVLKYLNNIGVISINA FT IIRAVNHVLWNKLEQTMYVDLIRNKN" FT gene complement(1145..1597) FT /gene="AC2" FT CDS complement(1145..1597) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:I1V8L6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I1V8L6" FT /protein_id="AFI38965.1" FT /translation="MRSSSPSKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSMEWRLYLGDSKSPLFQAPQPRRPSIHDEHGHTHDQDPIQLQP FT PESSGSAQMFSDLPNLDDLTPSDWSFLKGIQDPSPQVSQQYRCNIN" FT gene complement(1494..2582) FT /gene="AC1" FT CDS complement(1494..2582) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:I1V8L5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I1V8L5" FT /protein_id="AFI38964.1" FT /translation="MPPKRFVINSKNYFLTYPKCSLTKEEALSQIQNFQTPTSKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDFVLQFHN FT LNANLDRIFQEPPAPYISPFSSSSFDQVPEELEDWASENVVDPAARPLRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLY FT SGSNQSTAQGSEEAQPEEESRS" FT gene complement(2126..2434) FT /gene="AC4" FT CDS complement(2126..2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I1V8L7" FT /protein_id="AFI38966.1" FT /translation="MRMGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTFRELN FT QAPMSSPTSTRTGTLSSGESFRSMEDQQEEDNRQPTTLTPQHLTQAVSQRLLESLGN" XX SQ Sequence 2735 BP; 673 A; 610 C; 660 G; 792 T; 0 other; accggatggc cgcgcgtttt tttgtggccc ctcgaccaat cacatctcgc gctcaaagct 60 taaataactc tcccgcctgt tataaatact tacgctctaa gtatccgctt gcaaaatgtg 120 ggatccactg gttaacgagt tccccgagac ggttcacggg tttcggtgca tgcttgccat 180 caaatatctt cagctactct ctcaggaata ctctcccgat acggtaggtt acgatctaat 240 acgcgatttg atctgtattt tgcgttccag gaattatgtc gaagcgtcct gcagatatcg 300 tcatttctac ccccgcgtcg aaggtgcgtc ggcgtctgaa cttcgacagc ccgtacgcga 360 cccgtgtggc tgtccccact gtccgcgtca caaaatcgcg aatgtgggcg aacaggccca 420 tgaatcggaa gcccagaatt tacaggatgt acagaagccc tgatgttcca aagggctgtg 480 agggtccatg taaggtacag tctttcgagt ccagacacga tgtagtgcat ataggtaagg 540 taatgtgcat cagtgatgtc acccgcggta ctgggctgac ccatcgagta gggaagcgtt 600 tctgcgtgaa atctgtttat gttttgggta agatatggat ggatgaaaac atcaagtcca 660 aaaatcatac taacaatgtc atgttctttc tcgcccgtga tcgacggccc actgacaagc 720 ctcaggattt tggagaggtg ttcaacatgt ttgacaacga gcctagcact gccactgtga 780 agaatatgca tcgagaccgc taccaggtat tgcgtaagtg gtatgcaacc gtcacgggtg 840 gacagtatgg tgcaaaggaa caggcccttg tcaagaagtt tgttagggtt aacaattatg 900 tagtttataa ccagcaggag gctggtaaat atgagaatca caccgagaat gctctgatgt 960 tgtatatggc atgtacccat gcctctaatc ccgtgtacgc gactcttaag attaggattt 1020 acttctacga ttctgtaacg aactgaaatt aataaatgtt taatttttat ttctgatcag 1080 gtctacatac atagtttgct ctaatttatt ccataataca tgatttacag ccctaataat 1140 tgcattaatt gatattacac cgatattgtt gagatacttg aggacttggg tcttgaatac 1200 ccttaagaaa agaccagtcg gagggtgtaa ggtcgtccag attcggtagg tcagaaaaca 1260 tttgtgcact cccagagctc tccggaggtt gtagttgaat tggatcctga tcgtgagtat 1320 gtccatgttc gtcgtgaatg gacggacgtc gtggctgagg agcttgaaat agaggggatt 1380 tggaatctcc cagatatagg cgccattcca tgcttgagct gcagtgatgg gttcccctgt 1440 gcgtgaatcc atgattgtgg cagttgatgg acagataata agaacacccg cattcaagat 1500 ctactctcct cctccggttg cgcctcttcg cttccctgtg ctgtactttg attggaacct 1560 gagtacagtg gtccttcgag ggtgacgaag atcgcatttt tgacggccca gttctttaat 1620 gcggtgttct tttcctcgtc gaggaattcc ttataactgc tgttgggacc aggattgcac 1680 aggaagattg tcggtatccc gcctttaatt tgaactggct tcccgtattt tgtgttggac 1740 tgccagtctc tttgggcccc catgaactct ttaaagtgtt tgaggaagtg cgggtcaacg 1800 tcatcaatga cgttatacca agcgtcgtta ctgtatactt tgggacttag gtccaggtgt 1860 ccacacaaat agttgtgtgg tcccagtgac ctagcccaca tcgtcttccc cgttcgactg 1920 tctccctcaa ttactatact ctgaggtcta aggggccgcg cagcgggatc gacaacgttc 1980 tcggacgccc aatcttcaag ttcttctgga acttgatcga aagaagatga agaaaaagga 2040 gaaatatagg gagccggtgg ctcctgaaag attctgtcta gatttgcatt taaattatga 2100 aattgtagta caaaatcttt aggagctagt tccctaatga ctctaagagc ctctgactta 2160 ctgcctgcgt taagtgctgc ggcgtaagcg tcgttggctg tctgttgtcc tcctcttgct 2220 gatcttccat cgatctgaaa ctctccccac tcgagagtgt ccccgtcctt gtcgatgtag 2280 gacttgacat cggagcttga tttagctccc tgaatgttcg gatggaaatg tgctgacctg 2340 cttggggaga ccaggtcgaa gaatcgctga ttctggcact tgtatttccc ctcgaactgg 2400 atgagcacgt gcagatgagg ttccccattc tcatgtaatt ctcggcagat tttaatatat 2460 ttttttgaag ttggggtttg gaaattctgg atttgggaaa gtgcttcctc tttggttagt 2520 gagcacttag gataagtgag gaaataattt ttggagttta taacgaagcg ctttggaggc 2580 atgttgacca aagttgagac ccaattgacc gctctcgcaa cttatccctg gtatatcggg 2640 tctcaatata tagtgagacc caaatggcac aattgtaatt tctccaataa attcaaaatc 2700 ctcacgctcc aaaaagcggc catccgtata atatt 2735 //