ID   JQ895560; SV 1; linear; genomic RNA; STD; VRL; 1494 BP.
XX
AC   JQ895560;
XX
DT   26-JUN-2012 (Rel. 113, Created)
DT   26-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Tobacco mosaic virus isolate TMV-SoyIn movement protein and capsid protein
DE   genes, complete cds.
XX
KW   .
XX
OS   Tobacco mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-1494
RA   Kumar A., Shilpi S., Maheshwari Y., Lal S.K., Mandal B.;
RT   "Molecular characterization of a new strain of soybean infecting Tobacco
RT   mosaic virus in India based on host reactions and 3' end genome sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-1494
RA   Kumar A., Shilpi S., Maheshwari Y., Lal S.K., Mandal B.;
RT   ;
RL   Submitted (03-APR-2012) to the INSDC.
RL   Plant Virology Unit, Division of Plant Pathology, Indian Agricultural
RL   Research Institute, Pusa Campus, New Delhi, Delhi 110012, India
XX
DR   MD5; d0b89778c814918f61a2f6eb6ac1562a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1494
FT                   /organism="Tobacco mosaic virus"
FT                   /host="Glycine max"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="TMV-SoyIn"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="Jan-2011"
FT                   /db_xref="taxon:12242"
FT   CDS             1..807
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q9QPN6"
FT                   /db_xref="InterPro:IPR001022"
FT                   /db_xref="InterPro:IPR028919"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QPN6"
FT                   /protein_id="AFM73898.1"
FT                   /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH
FT                   ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT
FT                   LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC
FT                   IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK
FT                   GKNSSSDRSVPNKNYRNVKDFGGMSLKKNNLIDDDSEATVAESDSF"
FT   CDS             810..1289
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q77LT8"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="PDB:2OM3"
FT                   /db_xref="PDB:2XEA"
FT                   /db_xref="UniProtKB/TrEMBL:Q77LT8"
FT                   /protein_id="AFM73899.1"
FT                   /translation="MSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVV
FT                   QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT
FT                   TAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT"
FT   3'UTR           1290..>1494
XX
SQ   Sequence 1494 BP; 448 A; 269 C; 373 G; 404 T; 0 other;
     atggctctag ttgttaaagg aaaagtgaat atcaatgagt ttatcgacct gacaaaaatg        60
     gagaagatct taccgtcgat gtttacccct gtaaagagtg ttatgtgttc caaagttgat       120
     aaaataatgg ttcatgagaa tgagtcattg tcagaggtga accttcttaa aggagttaag       180
     cttattgata gtggatacgt ctgtttagcc ggtttggtcg tcacgggcga atggaacttg       240
     cctgacaatt gcagaggagg tgtgagcgtg tgtctggtgg acaaaaggat ggaaagagcc       300
     gacgaggcca ctctcggatc ttactacaca gcagctgcaa agaaaagatt tcagttcaag       360
     gtcgttccca attatgctat aaccacccag gacgcgatga aaaacgtctg gcaagtttta       420
     gttaatatta gaaatgtgaa gatgtcagcg ggtttctgtc cgctttctct ggagtttgtg       480
     tcggtgtgta ttgtttatag aaataatata aaattaggtt tgagagagaa gattacaaac       540
     gtgagagacg gagggcccat ggaacttaca gaagaagtcg ttgatgagtt catggaagat       600
     gtccctatgt caatcaggct tgcaaagttt cgatctcgga ccggaaaaaa gagtgatgtc       660
     cgtaaaggga aaaatagtag tagtgatcgg tcagtgccga acaagaacta tagaaatgtt       720
     aaggattttg gaggaatgag tttaaaaaag aataatttaa tcgatgatga ttcggaggct       780
     actgtcgccg aatcggattc gttttaaata tgtcttacag tatcactact ccatctcagt       840
     tcgtgttctt gtcatcagcg tgggccgacc caatagagtt aattaattta tgtactaatg       900
     ccttaggaaa tcagtttcaa acacaacaag ctcgaactgt cgttcaaaga caattcagtg       960
     aggtgtggaa accttcacca caagtaactg ttaggttccc tgacagtgac tttaaggtgt      1020
     acaggtacaa tgcggtatta gacccgctag tcacagcact gttaggtgca ttcgacacta      1080
     gaaatagaat aatagaagtt gaaaatcagg cgaaccccac gactgccgaa acgttagatg      1140
     ctactcgtag agtagacgac gcaacggtgg ccataaggag cgcgataaat aatttaatag      1200
     tagaattgat cagaggaacc ggatcttata atcggagctc tttcgagagc tcttctggtt      1260
     tggtttggac ctctggtcct gcaacttgag gtattcaaga tgcataataa ataacggatt      1320
     gtgtccgtaa tcacacgtgg tgcgtacgat aacgcatagt gtttttccct ccacttaaat      1380
     cgaagggttg tgtcttggat cgcgcgggtc aaatgtatat ggttcatata catccgcagg      1440
     cacgtaataa agcgaggggt tcgaatcccc ccgttacccc cggtaggcgg ccca            1494
//