ID   JQ895557; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   JQ895557;
XX
DT   25-JUN-2012 (Rel. 113, Created)
DT   25-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Cucumber mosaic virus coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-657
RA   Liu A., Liu X., Sun S., Gou Y.;
RT   "Induction of antiviral defense in black pepper by Cucumber mosaic virus
RT   coat protein";
RL   Unpublished.
XX
RN   [2]
RP   1-657
RA   Liu A., Liu X., Sun S., Gou Y.;
RT   ;
RL   Submitted (03-APR-2012) to the INSDC.
RL   Spice and Beverage Research Institute, Chinese Academy of Tropical
RL   Agricultural Sciences, Xinglong Tropical Botanical Garden, Wanning, Hainan
RL   571533, China
XX
DR   MD5; cd9437e1de8facc7fd01167b14a99309.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Cucumber mosaic virus"
FT                   /host="black pepper"
FT                   /isolate="HNP"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collected_by="Liu Aiqin, and Liu Xiangyang"
FT                   /collection_date="25-Sep-2011"
FT                   /identified_by="Liu Aiqin, and Liu Xiangyang"
FT                   /PCR_primers="fwd_name: cp-f, fwd_seq:
FT                   gcggatccatggacaaatctgaatcaac, rev_name: cp-r, rev_seq:
FT                   gagctctcaaactgggagcacccctga"
FT                   /db_xref="taxon:12305"
FT   gene            <1..657
FT                   /gene="cp"
FT   CDS             <1..657
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:I6S3Z2"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:I6S3Z2"
FT                   /protein_id="AFM56037.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLRPPKMDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKVLYDLSAMRTDIGDMRKYAVLVYSKDDALETDELVFHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 146 A; 173 C; 158 G; 180 T; 0 other;
     atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg cctcctcctc tgcggatgct aactttaggg tcttgtcgca gcagctttcg       120
     cgactcaata agacgttagc agctggtcgt ccaactatta accacccaac ctttgtgggt       180
     agtgaacgct gtaaacctgg gtacacgttc acatctatca ccctgagacc accgaagatg       240
     gaccgtgggt cctattatgg taaaaggttg ttacttcctg attcagtcac ggagttcgat       300
     aagaaacttg tttcgcgcat ccaaattcga gttaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tatccgttgc cgccatctct       420
     gctatgttcg cggacggagc ctcaccggta ctggtttatc agtacgccgc atctggagtt       480
     caagccaaca acaaagtgtt gtatgatctt tcggcgatgc gcactgatat tggcgacatg       540
     cgtaagtacg ccgttctcgt gtattcaaaa gacgatgcac ttgagacgga tgagttagtt       600
     tttcatgtcg acattgagca ccaacgcatt cccacgtcag gggtgctccc agtttga          657
//