ID JQ867094; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC JQ867094; XX DT 25-JUN-2012 (Rel. 113, Created) DT 25-JUN-2012 (Rel. 113, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate PY1, complete genome. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Tang Y.F., He Z.F.; RT "Molecular characterization of tomato yellow leaf curl begomoviruses in RT Guangdong, China"; RL Unpublished. XX RN [2] RP 1-2740 RA Tang Y.F., He Z.F.; RT ; RL Submitted (01-APR-2012) to the INSDC. RL Plant Protection Research Institute, Guangdong Academy of Agricultural RL Sciences, Jinying Rd No. 7, Tianhe District, Guangzhou, Guangdong 510640, RL China XX DR MD5; b5e2fcaa7c7161a0b9866650ee4468ea. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="A" FT /host="Lycopersicon esculentum" FT /isolate="PY1" FT /mol_type="genomic DNA" FT /country="China" FT /collected_by="Z.F. He" FT /collection_date="09-May-2011" FT /db_xref="taxon:196093" FT gene 132..473 FT /gene="AV2" FT CDS 132..473 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q09M62" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q09M62" FT /protein_id="AFM56689.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /db_xref="GOA:Q09M61" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09M61" FT /protein_id="AFM56688.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:B2MVN3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B2MVN3" FT /protein_id="AFM56692.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVIKGTIDAQFSHIIKFKIY" FT gene complement(1207..1614) FT /gene="AC2" FT CDS complement(1207..1614) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:I6S999" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6S999" FT /protein_id="AFM56691.1" FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKKRPVRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT gene complement(1514..2602) FT /gene="AC1" FT CDS complement(1514..2602) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:I6RBJ3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6RBJ3" FT /protein_id="AFM56690.1" FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGIFQVDGRSTRGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNNNLDRIFAPPLEVYISPFNFSSFDRVPRELVEWVAENVRDSAARPWRPMSIVVEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL FT YSRANQGPTQNSEKETSSQAEG" FT gene complement(2152..2445) FT /gene="AC4" FT CDS complement(2152..2445) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q072R9" FT /protein_id="AFM56693.1" FT /translation="MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQ FT QMSKPIWRKTETCLIMEFSRSMEDQLEEVANLQTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2740 BP; 724 A; 537 C; 610 G; 869 T; 0 other; accggatggc cgcgattttt ttaagtgggt cctacgcact aatgttggtc ggccaataga 60 aacgctccct caaagcttat taacaaaaat acccgttata aatacttggt ggctaagtta 120 cagtcggtaa aatgtgggat ccacttttaa atgattttcc ggagtctgta catggtctac 180 ggtgtatgct tgccattaag tatctacatc ttgtagaaaa tacatattcc ccggatactt 240 tgggttacga tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 300 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg tctgaacttc 360 gccagcccat atggcaaccg tgtagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcctc gtggttgtga aggcccatgt aaggtacagt catttgaaca gcgtcatgat 540 atatcccatg tgggcaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tctatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagcactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgtcgattc 840 caggctacgg tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagaag ctgctaaata cgataaccat 960 acagagaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tcagttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaactgagc atcgattgtg ccctttatta cattgtatag tacatgtctc 1140 attgctctaa atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1200 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gttccgtaga aatggtctct ggttgtgttg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca 1500 cccacaagga agatcaaccc tccgcctgcg aactggtctc tttttcgcta ttttgtgttg 1560 gaccttgatt ggcacgtgag tagagtggct cggtgagggt gatgaattcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg atcgacgtca tcaatgacgt tgtaccatgc ctcattgctg tagactcttg 1860 ggcttaggtc aagatgacca cacaagtaat tgtgtgggcc tagagacctg gcccaaagtg 1920 tcttacctgt acgactctct ccctctacaa caatactcat gggtctccat ggccgcgcag 1980 cggaatccct cacgttctcg gcaacccatt ctacaagttc tcttggaact cgatcaaatg 2040 aagaaaaatt aaaaggagaa atataaacct ccaatggagg tgcaaaaatc ctatctaaat 2100 tattatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc cttaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg tttgcagatt 2220 ggcaacctcc tctagttgat cttccatcga cctggaaaat tccatgatca agcacgtctc 2280 cgtctttctc catataggtt ttgacatctg ttgagctctt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa tctgttattt ttacattgga 2400 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg tgaagctctc 2460 tgcaaaccct aatgaatagc ttatttgttg gggtttgtag agcttgtatt tgggaaagtg 2520 cctcttcttt ggttagggag cagtgtggat acgtgaggaa gtagttcttt gcatttatcc 2580 tgaatttatt aagtggaggc atgttgactt ggtcaatcgg tgtctctcaa acttctctat 2640 gtatcggtgt attggggtct tatttatatc tggacactaa atggcattta tgtaattaca 2700 taaaattacc aatgggtaaa gcggccatcc gtttaatatt 2740 //