ID   JQ818256; SV 1; linear; genomic RNA; STD; VRL; 960 BP.
XX
AC   JQ818256;
XX
DT   02-APR-2013 (Rel. 116, Created)
DT   21-AUG-2013 (Rel. 117, Last updated, Version 3)
XX
DE   Garlic common latent virus isolate Raug coat protein gene, complete cds.
XX
KW   .
XX
OS   Garlic common latent virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-960
RX   DOI; 10.1007/s11262-013-0909-z.
RX   PUBMED; 23553322.
RA   Pramesh D., Baranwal V.K.;
RT   "Molecular characterization of coat protein gene of Garlic common latent
RT   virus isolates from India: an evidence for distinct phylogeny and
RT   recombination";
RL   Virus Genes 47(1):189-193(2013).
XX
RN   [2]
RP   1-960
RA   Pramesh D., Baranwal V.K.;
RT   ;
RL   Submitted (06-MAR-2012) to the INSDC.
RL   Division of Plant Pathology, Indian Agricultural Research Institute, Pusa,
RL   New Delhi, Delhi 110012, India
XX
DR   MD5; 927912537eb55c6bc831a74f20e19bd5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..960
FT                   /organism="Garlic common latent virus"
FT                   /host="garlic"
FT                   /isolate="Raug"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="garlic cloves"
FT                   /collected_by="Pramesh D"
FT                   /collection_date="02-Nov-2010"
FT                   /db_xref="taxon:47900"
FT   CDS             1..960
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:M4H4T5"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:M4H4T5"
FT                   /protein_id="AFO83502.1"
FT                   /translation="MSTSETEEQRSRRLALERSDAERRKNDAAVRARQDAAIDSEEPAD
FT                   MQETSVNDVDLRQMENRVQEAKRFLERFNKLKKFQADNMTAGEIKNGGFETGRPKLNIA
FT                   ANLRGDTANVFTRPSMDALIALDFKAESLAVATAEDLAAITAKFEQLGVPTERLAPLCW
FT                   SIARYCADTSSSYVADPKGTFEYPGGAITRDAVYAVIKEVTTLRAFCRAFAPVVWNEML
FT                   IAKRPPAGWQTKGYTASTKYAAFDTFDYVLNSACVQPLEGIIRVPTDEETIAHMTNKRI
FT                   AIDRNRRNGRFSSTSSLVTGGMFGKDIKTNFHGSNNAD"
XX
SQ   Sequence 960 BP; 280 A; 194 C; 258 G; 228 T; 0 other;
     atgtcaacga gtgaaacaga ggaacagaga tcacgaagac tggctttaga gagaagcgat        60
     gctgaacgcc ggaaaaatga tgcagcagtg agagctaggc aggacgctgc tatcgattct       120
     gaggaacctg ctgacatgca agagacgagc gttaatgatg ttgatctgcg tcaaatggaa       180
     aatagggtcc aggaagctaa gcggtttttg gagcgcttca acaagcttaa gaagttccaa       240
     gcagacaaca tgacagcagg tgagatcaag aatggagggt ttgaaactgg gaggccaaaa       300
     ctgaacattg cggccaattt gcgcggcgac actgctaatg tgtttacaag gcctagcatg       360
     gatgctttaa tagcattgga cttcaaagct gaatccttgg cagttgcgac tgcagaagac       420
     ctagctgcta tcaccgctaa atttgaacag cttggggtgc caactgagag attggctcca       480
     ctttgttggt caattgcaag gtattgcgca gatacgagtt cttcatatgt ggctgacccg       540
     aaaggaactt ttgaataccc agggggtgcc ataacaaggg acgctgttta tgctgtcatc       600
     aaagaagtta cgaccctgag ggctttctgc agagctttcg caccagtggt ttggaatgag       660
     atgttaatcg ctaaaagacc tcctgctggt tggcaaacca aaggttacac tgctagtaca       720
     aagtatgctg cctttgatac tttcgattac gtgcttaatt ctgcttgcgt ccagccactt       780
     gaggggatca tacgggtgcc aactgatgag gagaccatag ctcacatgac caacaagcgg       840
     attgctattg ataggaatag gcgcaatggt cggttttcaa gcacaagcag tttagttact       900
     gggggcatgt tcggtaaaga tatcaaaaca aacttccatg gatccaacaa tgcagactag       960
//