ID JQ814719; SV 1; linear; genomic RNA; STD; VRL; 4675 BP. XX AC JQ814719; XX DT 31-MAR-2013 (Rel. 116, Created) DT 03-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Sweet potato virus C-6 replicase gene, partial cds; and triple gene block DE protein 1, triple gene block protein 2, triple gene block protein 3, and DE coat protein genes, complete cds. XX KW . XX OS Sweet potato C6 virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-4675 RA Fuentes S., De Souza J., Cuellar W., Savenkov E., Kreuze J.; RT "The complete genome of Sweet potato C6 virus and its phylogenetic RT relationship to other Carlaviruses"; RL Unpublished. XX RN [2] RP 1-4675 RA Fuentes S., De Souza J., Cuellar W., Savenkov E., Kreuze J.; RT ; RL Submitted (22-MAR-2012) to the INSDC. RL Virology, International Potato Center, Av. La Molina 1895 Lima 12, Peru XX DR MD5; 893ef6eadb5cf12002ffd5a6491efc97. XX FH Key Location/Qualifiers FH FT source 1..4675 FT /organism="Sweet potato C6 virus" FT /host="Ipomoea batatas" FT /mol_type="genomic RNA" FT /country="Dominican Republic" FT /collection_date="1994" FT /identified_by="S.Fuentes" FT /db_xref="taxon:1307958" FT CDS <1..1868 FT /codon_start=3 FT /product="replicase" FT /db_xref="GOA:M4QRJ4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:M4QRJ4" FT /protein_id="AGH32540.1" FT /translation="LILPQKYKDVFLVSSFDEKKIPETYVGNDAKLLTFGESTGLNFEF FT GCILLTGIGESVSENRWITALSRFSRNLALINLTGHSLDHIKAVYADRTLGKFLNKTFQ FT KSDFLNFLPGNPSFTSSFNSSVGASHGVKEEKVRGDPWLKGMLNLAQDPDVQDIEVQKV FT ANYSQSSKTHVARATSEVVRTSWVHKIREKFSREKRIGHLVSNQFAEEHSKNNGIIMTN FT AAERYESIYPRHKGSDTVTFLMAVKKRLRFSNPRVEAGKLNTASLYGKFMLNKFLSKIP FT LKTHLDHDKMDRANREFEEKKTSKPAATIENHNARSCTDWYADLAQVFMKSQHCTKFEN FT RFRDAKAAQTIVCFHHSVLCRFAPYIRYIEMKVKEVLPSNFYIHSGLSIESLDDWVRSN FT DFNGECTESDYEAFDASQDEYTLAFELALMEYLKLPKDLISDYRFIKLHLGSKLGMFSV FT MRFTGEASTFLFNTLANMLFTFLRYDLRGNESICFAGDDMCANRKLKLNLDYEDFLKRI FT QLKAKVQFTRKPTFCGWNLNSFGIYKKPQLVFERMKIAQETNNLHNCLDNYAIEMSFAY FT SLGEVATALMDDEELNSYYCCIRLIILNKHHLKSSVRLLFEKLRF" FT CDS 1883..2581 FT /codon_start=1 FT /product="triple gene block protein 1" FT /db_xref="GOA:J7GLW0" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:J7GLW0" FT /protein_id="AGH32541.1" FT /translation="MDVIVKKLRSRGFTFNKPIEGSFLVVNCVPGAGKSSLIRELIEED FT SRFEAFTFGHPDKPNVTNCFIKSSDEIRSRQFAIVDEYTEGDFRKFDPIAIFGDPCQST FT AFKEPNLICNYFSTRTFRFGKATAALLRSLGFNIWADKEDTVEIGHIFEREPEGQIVCY FT EPEIQRLVERHSGFALTVEDIRGITEDVVTFITSETKFDNKHSALIYLCLTRHMSKLLI FT LTPDGSYTSS" FT CDS 2559..2885 FT /codon_start=1 FT /product="triple gene block protein 2" FT /db_xref="GOA:J7GU58" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:J7GU58" FT /protein_id="AGH32542.1" FT /translation="MALTPPPDHSKSLLAICVGIAIALVLYSLTRSNLPHVGDNLHSLP FT HGGCYQDGTKSISYNSPARTYPASTLLAKSAFNPFLIVLLLSACIFILSKNQSHSCRSC FT RGYC" FT CDS 2858..3094 FT /codon_start=1 FT /product="triple gene block protein 3" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:J7GQ22" FT /protein_id="AGH32543.1" FT /translation="MQELQRLLLIVVISSLLGLLALNLLSQSENCLILITGESVRVVNC FT GITKDLLELVRDLKPFAFDRTPLGCLGCRIDKQ" FT CDS 3091..4008 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:J7GKV6" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:J7GKV6" FT /protein_id="AGH32544.1" FT /translation="MSEDNQKGLNETDEQYEARKQKEWDNRNAKNQSKAKSQKKASDKT FT AIEALIKLSEEMTQRFDDIENFSRDHVPVHKVKNANFFDHRNKTPVSDKLKVDKSNIFS FT NPTIDNLEEMVWQSESNGLASAEALAKISAKIQGLGYPREDMAQLFWDLSRYCANTSSS FT AQMKPEGVFEHSNGTVSKAAVLAVIKDQSTLRKVCRSYAPIVWNHMLITNSPPSDWQAR FT GFTESTKYAAFDFFDFILNPAAVQPLEGLIRTPTDDETIAHATYKRIALDKHARNKRFA FT NYSSEITGGKFGPDLTRKWRDDKR" XX SQ Sequence 4675 BP; 1441 A; 853 C; 1026 G; 1355 T; 0 other; ttttaatctt gccacagaaa tataaggatg ttttccttgt gtctagcttt gatgagaaga 60 agataccaga aacttatgtg ggaaatgatg caaagctctt gacttttggt gaatctactg 120 gccttaattt tgaatttggc tgtattttac tcacaggaat tggggagtca gtgagcgaaa 180 acagatggat tacagccttg tccaggtttt ccaggaatct agcgttaatt aatcttactg 240 gtcatagttt ggaccacata aaggcagtct atgctgacag gactttgggc aaattcctca 300 ataagacttt ccagaaaagt gatttcctaa atttcttacc tggaaatcca agctttacct 360 caagtttcaa ttcatctgtt ggtgcttccc atggagtcaa agaagagaaa gttagaggag 420 atccatggct aaaaggaatg ctcaatcttg ctcaagatcc tgatgttcaa gacatcgaag 480 tgcagaaggt agccaactac tcccaatcaa gcaaaactca tgtagctagg gcaacatcag 540 aggttgttag aactagctgg gttcacaaaa tcagagaaaa gttttctagg gagaagagaa 600 ttggacattt ggtatcaaac cagtttgctg aggagcacag taaaaataat gggattataa 660 tgacaaatgc tgctgagaga tatgagtcaa tataccccag gcacaaaggt agcgatactg 720 ttactttcct gatggctgtc aagaagagat taaggttttc taatccaaga gttgaagcag 780 ggaagttaaa tacagcctca ttatatggaa agttcatgct caataagttc ttatccaaga 840 taccccttaa gacccatttg gaccatgaca agatggatag agctaatagg gaatttgagg 900 agaagaaaac tagcaagcca gccgcaacaa ttgaaaatca taacgccaga tcttgcacag 960 attggtatgc tgatcttgct caagttttta tgaagtcaca gcactgtaca aagtttgaaa 1020 acagatttag agatgccaaa gctgcccaaa ctattgtatg ttttcaccac tctgtacttt 1080 gcaggtttgc tccttatatt aggtatatag agatgaaagt caaagaagtg ctaccatcca 1140 atttctacat acactctgga ttgagcatag aaagcttgga tgactgggtg aggagcaacg 1200 actttaatgg agaatgcaca gagtccgact atgaggcttt tgatgcaagc caagatgagt 1260 acactctagc atttgagctt gctttgatgg agtatttgaa gctgcctaag gatttgataa 1320 gtgattaccg attcatcaaa ttgcatttgg ggtccaagct aggcatgttt tctgttatga 1380 gattcactgg agaagccagc accttcttgt ttaatactct ggccaacatg ttgttcactt 1440 ttctccgcta tgatcttaga ggtaatgaat ctatctgctt tgcgggagat gacatgtgcg 1500 ctaataggaa gttgaagctg aatctggatt atgaggattt tctaaaaaga attcaattga 1560 aggccaaggt acaattcacg agaaaaccga ctttttgtgg ctggaactta aattcttttg 1620 gcatttacaa aaagcctcaa ctagtgtttg agaggatgaa gatagctcaa gagacaaata 1680 atcttcataa ttgcctggac aattatgcca ttgaaatgtc tttcgcctac tcacttgggg 1740 aagttgccac agctcttatg gacgatgaag agcttaatag ctattattgt tgcattagat 1800 tgattatatt aaataagcat catttaaaat cctctgttag actcttattt gagaagctta 1860 ggttttagct atacttattg atatggatgt gatagttaag aaacttagga gtagaggttt 1920 tacttttaat aagcctattg aaggtagttt tctagtagtt aattgtgttc ctggtgctgg 1980 caagagttcc ttgattaggg agttaattga agaagactct aggtttgagg ctttcacctt 2040 tggacaccca gataaaccta atgtgaccaa ttgcttcatc aaatcttcag atgaaataag 2100 atcaagacag tttgccattg ttgacgaata cacagaagga gatttccgca aatttgatcc 2160 cattgccatt tttggggacc cttgtcagtc aactgctttc aaagagccca acctgatttg 2220 caattatttc tctacaagaa ctttcagatt tgggaaggcg actgcagctt tgctgaggtc 2280 acttgggttt aacatttggg ctgataaaga ggatactgtt gaaattggac acatttttga 2340 gcgtgaacct gaaggccaaa tcgtgtgcta tgagccagag attcaaagac tagttgagag 2400 gcattctggc tttgccttga ctgttgaaga catcagagga attactgaag atgttgttac 2460 ttttataaca tctgaaacta agtttgacaa taagcattca gctttgatct acctctgttt 2520 aactagacac atgagtaagc tgcttattct cactccggat ggctcttaca cctcctcctg 2580 atcattcgaa aagcttgttg gcaatttgtg ttggaatagc tattgcatta gttttgtact 2640 ccttgactag gagcaatttg cctcatgtgg gggataatct tcactctttg cctcacggag 2700 gatgttatca ggatggtact aaatccataa gctacaactc tcctgctaga acttaccctg 2760 ccagtaccct tttagctaaa agtgctttca atccttttct catagtctta cttttatcag 2820 cctgtatttt tatactttca aagaaccaaa gccactcatg caggagttgc agaggttact 2880 gttaatagta gttatttcca gtttgcttgg tttgttagct ttaaatcttt taagtcaatc 2940 tgaaaactgc ttgatattga ttacaggtga atctgttagg gttgtgaact gtggcattac 3000 aaaagatttg ctggagcttg ttagagatct taaacctttt gcatttgata gaaccccttt 3060 aggttgtcta gggtgcagaa ttgataaaca atgagtgaag ataatcaaaa aggattgaat 3120 gagacggatg aacaatatga ggcccgaaag caaaaagaat gggacaatcg aaatgccaaa 3180 aatcaaagca aggccaaaag tcaaaagaag gctagtgata agaccgccat tgaagcttta 3240 atcaaattga gtgaggaaat gacgcagcgg ttcgatgata ttgaaaattt ttctagagat 3300 catgttccgg ttcacaaggt gaaaaatgca aatttctttg accatcggaa taagacaccg 3360 gtttctgata agttaaaggt ggataagagt aatatcttta gcaatcctac aattgacaac 3420 ttagaggaaa tggtctggca atctgagtcg aacggcctgg ctagtgcaga ggctctagct 3480 aaaataagcg ccaagattca aggcctgggt taccccagag aagatatggc tcagttattt 3540 tgggacttgt ctaggtactg tgccaacact agctcgtctg cccagatgaa gcctgagggg 3600 gttttcgaac attctaatgg aactgtgtcc aaggcagctg tcctagctgt cataaaagat 3660 caatcaactc tgaggaaggt atgcagaagc tatgctccaa ttgtttggaa ccatatgctg 3720 attactaatt ctcctccttc tgattggcaa gctagaggtt ttactgaaag cactaagtat 3780 gcagcttttg atttctttga tttcattctc aatccagctg cagtgcaacc attagaaggt 3840 ctcattagga cccctactga tgatgaaaca attgctcatg ccacatacaa aaggattgct 3900 ctcgacaaac atgcaaggaa caagaggttt gctaattact cttcagaaat cacaggagga 3960 aagtttggac ctgacttgac tagaaaatgg agagatgaca aaaggtaggt cttacatttc 4020 gcccgaaggc gttaaactac ggtggcattc aattgctgca ggaatctggg ctgctagtgc 4080 caaaactaga ttgggcatta acttgtccta ttggccttag aaaaggtcgc cactcatggc 4140 taaaatgggg ttcttcaggg aggactgcaa ataacctgcc cacccaaggg ttaatgggcg 4200 catgttggtg gctagggcgt aagaacaacc cactatgctt gccaggaaca agtaactggc 4260 caactagagg tggacctcta gcgtccgtca tagcgaatta tgactatcag aataattctg 4320 aattcagata atctgacgac tgcccaggcg ttattggggg tagagtgagg ggaaatcccg 4380 tagttctact tgtgttacca agagtatcgg cagtgacggc ccctttgatc taagaagaca 4440 ggatttgggg cacaacgact agctcaagga cacaaaagcc gatttcaagc tggctaaagc 4500 tgttcgttct ggcccgtact aatagaccag acttatcaaa gttttctgac aaagcctaat 4560 taataaataa atcagagaac tataaactaa tggtttttca ttattaattt tagcctattc 4620 aagagccaac gagctcctct ggaaaaaaac aaaaaaaaaa aaaaaaaaaa aaagt 4675 //