ID   JQ768542; SV 1; linear; genomic RNA; STD; VRL; 1057 BP.
XX
AC   JQ768542;
XX
DT   03-JUN-2012 (Rel. 113, Created)
DT   03-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Switchgrass mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Switchgrass mosaic virus
OC   Viruses; Riboviria; Tymovirales; Tymoviridae; Marafivirus.
XX
RN   [1]
RP   1-1057
RA   Agindotan B.O., Okanu N.U., Oladeinde B.T., Voigt T.B., Gray M.E.,
RA   Long S.P., Bradley C.A.;
RT   "Detection of Switchgrass mosaic virus in Miscanthus and other grasses";
RL   Unpublished.
XX
RN   [2]
RP   1-1057
RA   Agindotan B.O., Okanu N.U., Oladeinde B.T., Voigt T.B., Gray M.E.,
RA   Long S.P., Bradley C.A.;
RT   ;
RL   Submitted (09-MAR-2012) to the INSDC.
RL   Energy Bisociences Institute, University of Illinois, 1206 W. Gregory
RL   Drive, Urbana, IL 61801, USA
XX
DR   MD5; 4782d4a261d8c146530931199fbb456e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1057
FT                   /organism="Switchgrass mosaic virus"
FT                   /host="Miscanthus x giganteus (Kurt Bluemel)"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collected_by="Bright O. Agindotan"
FT                   /collection_date="Jul-2011"
FT                   /identified_by="Bright O. Agindotan"
FT                   /note="acronym: SwMV"
FT                   /db_xref="taxon:1027869"
FT   CDS             <1..941
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains capsid protein"
FT                   /db_xref="GOA:I3V5Q9"
FT                   /db_xref="InterPro:IPR000574"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:I3V5Q9"
FT                   /protein_id="AFK73080.1"
FT                   /translation="GEAPESLLSMAFQGLKWASHSVYALMNSSHRRQLLHSSRRPRSLP
FT                   EDPEVSQLQGELLHQFQSLHLPLRGASMPNPLAAPFRLLPLGSASLGPSYSVAPLQPPP
FT                   ASASPDSMAENATQVGPAPARDDRLDRQPAIPAPPRVVETAPTHYIDLPFQWKITDFTG
FT                   AAAYHDTGDLSASPVLTTLCAPYRHAELISVELSLAPCPPSFTKPIMFTVVWTPATLSP
FT                   TDGKETDFYGGRQISIGGPVMLSSTTAIPADLTRMNPVIKSSVAYRDTPRWTMSVPAVS
FT                   GGDTKVNLATGFIRGVIRVSAPSGAAIKAAS"
XX
SQ   Sequence 1057 BP; 184 A; 413 C; 241 G; 219 T; 0 other;
     ttggtgaggc tcccgagtct ctcctttcca tggctttcca aggcttgaaa tgggcgtccc        60
     actccgtcta cgccctcatg aactcgagtc accgtcgcca gctcctccac agctctcgcc       120
     gtcctcgctc tctccccgaa gaccctgagg tctctcagct tcagggtgaa ttgcttcacc       180
     agttccaatc tctccacctg ccgctccgag gagcttccat gccaaatccg ctcgctgcgc       240
     cctttcgcct cctgcctctc ggttcagcct ccctcggtcc atcttactcc gtggcgcctc       300
     tccagcctcc gcctgcctcc gcgtcccccg actcaatggc cgaaaatgcc acgcaagtcg       360
     ggcccgctcc agctcgcgat gaccgccttg atcgccagcc tgctattcct gctcctcctc       420
     gtgtggttga aaccgcgccg acgcactaca tcgacctccc gttccagtgg aaaatcaccg       480
     acttcaccgg agccgcagca taccacgaca caggcgacct ctcagcctcc ccggtactga       540
     cgactttgtg cgccccatac cgacatgctg agctcatctc agttgagctt tcgctcgccc       600
     cctgcccgcc gtccttcacc aagcccatca tgttcaccgt cgtctggacg ccggccactc       660
     tctcacccac cgatgggaaa gagacggact tctacggagg ccgtcaaatt tccatcggcg       720
     gtccggtcat gctctctagc accaccgcca tcccagccga cctcactcgt atgaaccccg       780
     tcatcaagtc gagcgtcgcc taccgtgaca cccctaggtg gaccatgtcc gtccccgccg       840
     tctctggcgg tgacaccaag gtcaacctcg ccaccggctt catccgggga gtcatccgcg       900
     tctccgctcc atccggagcc gccatcaagg ccgcctctta ggcgcctccc gcgagaagga       960
     aaactcgccc ggctataggc cggtaagatg ttaaacctcc agccctccgt gatcgcaaaa      1020
     tcttaggtag caggtcggcc ataagacctg tgggcaa                               1057
//