ID JQ717263; SV 1; linear; genomic RNA; STD; VRL; 6922 BP. XX AC JQ717263; XX DT 21-AUG-2012 (Rel. 113, Created) DT 07-OCT-2012 (Rel. 114, Last updated, Version 2) XX DE Golden Gate virus isolate BC segment L, complete sequence. XX KW . XX OS Golden Gate virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Arenaviridae; Reptarenavirus. XX RN [1] RC Publication Status: Online-Only RP 1-6922 RX PUBMED; 22893382. RA Stenglein M.D., Sanders C., Kistler A.L., Ruby J.G., Franco J.Y., RA Reavill D.R., Dunker F., Derisi J.L.; RT "Identification, characterization, and in vitro culture of highly divergent RT arenaviruses from boa constrictors and annulated tree boas: candidate RT etiological agents for snake inclusion body disease"; RL MBio 3(4):e00180-e00112(2012). XX RN [2] RP 1-6922 RA Stenglein M.D., Franco J.Y., Kistler A.L., Sanders C., Reavill D., RA Dunker F., DeRisi J.L.; RT ; RL Submitted (28-FEB-2012) to the INSDC. RL Department of Biochemistry, University of California, San Francisco, Byers RL Hall, Rm s403c, 1700 4th St, San Francisco, CA 94158-2330, USA XX DR MD5; c6fa43b23dac521fc3b944c4056f71ec. DR EuropePMC; PMC6424867; 30918506. XX CC GenBank Accession Numbers JQ717263, JQ717264 represent sequences CC from the 2 segments of Golden Gate virus isolate BC. XX FH Key Location/Qualifiers FH FT source 1..6922 FT /organism="Golden Gate virus" FT /segment="L" FT /host="Boa constrictor" FT /isolate="BC" FT /mol_type="genomic RNA" FT /country="USA:California" FT /collection_date="08-Jul-2009" FT /db_xref="taxon:1223562" FT gene 121..471 FT /gene="Z" FT CDS 121..471 FT /codon_start=1 FT /gene="Z" FT /product="Z protein" FT /db_xref="GOA:J7H5K9" FT /db_xref="UniProtKB/Swiss-Prot:J7H5K9" FT /protein_id="AFP93554.1" FT /translation="MSGSTAIGLTTEVISIITFILVIAIFVIEIVSCVTMMTLKAITLK FT KRLSFCQGCGKNASLVILPCKNKVCMECALKMRCPVCYEACLWCENPDGSLSSLALINK FT ERNKVRDNLPEP" FT gene complement(630..6830) FT /gene="L" FT CDS complement(630..6830) FT /codon_start=1 FT /gene="L" FT /product="L protein" FT /note="L polymerase" FT /db_xref="GOA:J7H8Q3" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR026382" FT /db_xref="UniProtKB/Swiss-Prot:J7H8Q3" FT /protein_id="AFP93553.1" FT /translation="MSSICPEDSELERLKGLVLEVLSYERDLYRPGWISNTAGEMAMNA FT IKLRSTIHELNCCRDTGLKHNNDLKEMNELFDEAIGSHETVKTIVPDGYLIDKNNNVLT FT VLEVSTRTEPSDQTKKVQLDRLKYDGFENLLRPLGWTLNVITISEKKPRIGRIPEILMF FT KLLSTSLSILSYTTDICNWISEEDYLELKKSLTSYDFRTLTEEFKGQRLLFDIESAEDP FT YKDLFDWMLKNSEKLPFSLNWEGPKITEMIQDFKREDKQLRLLEIMRSAVTGLNFRTNH FT LSLLNKLKSLNLLNTRRKQNKVYDYIALMLFVRDSEIHDFPKGWFPSVNDRLVRVDSVD FT SPLSVYKKLVERMIKSLQSLQNEVGSKQKLGELKILIKFLEESSNNFIEPPVLKTMYFG FT LPARVLVPQPSLCLKIINDVPYEPQTTIVTSDETDTIEKVALNLILSQKTRSTPRASMS FT EEFFFQSVNGCLLLYKCTGEGQKAFSILCKSYKQGELRYSFYSFNINPSRLFPLIFSAK FT PIANLVDQLIMLINPICEDAERLQETIKRQESVNEFLISSEYSDKQIDDLKVKVTYLIY FT GILTTPTKRLQIELQSQRYYIMDTLSIIHHKDLKAKVIGNCITYDEYYLRDLAHGLINE FT ILSCKNIGLFLKVTWALNISYLCHLITKETPDRLSDLRDCYEKFFKPKFQFMSNMIYDC FT KSVDELVERMEQEVNDFIQCEEPSFETKPFLYEPILADFLKWISTEKFNGIDGEQLLNP FT KDYLTSNIDVLDLTSNKSTFKRSKNHHMNDVLDQQYDTEKLLKRVISERLHKRITKSTK FT AGDDPSTAKSFKSGGESVKERNWKAGGEKRKKTRLAYEEFLGIVQGLIVETDSEEDLND FT FLLQINKCLHEIDDELKKMNPKEINDLQKTKYCLVLDVIRELLGPEVCDLVRSTCYSTK FT LSDLPTDLLRKEAYERIVGETMSRAPLEFPRNVDTIDVTNISAGMVVTKYELKEFFSSF FT KFLLLWAGFNNFQGTYDHRSGPQSSFLSISNKYRGESMLSTRVTNSEALQDRLIAIKYG FT APTLRNILFSTLNLEMKNSEIGPNNKPLQFGLAIKEQVGGPRELYVGDSDTKLITRVLE FT ETSRNIGNRLNNSCLNSDKKFSNFMKRIARSFFENEIVLSMDHSKWGPFNSPLQYHLMF FT EAMESINDTDGRRLDFSFAKTILKWHLFKAVETPQILAEDVILSSLDVSLGRRDRQIGK FT ERTFETFMVDAVLSNKPVPSQIHSWFDMGQGILHHTSDLYGSLASEYITKKIKEIFGVR FT SSTMNTSDDMVLLFHIKYKNEDSNQKDELLLITNFLCLVSNCLNKHISPKFCCSPLVGE FT FKSHFEVEATMVPLFTKFFAASINNFRCKTPMELFNTCDAIVEQGICNGMSLKVADSLK FT GRMVEMLGWLGYVADPLMKPVESRQQDWLEGCLSYRKLRSLESWLMDLGIGKLKLDVLK FT LELLKVIKELRESSIAPSVAYNKMVDISKSELGEITLWFPTLNGEFKLIVRSKLNLGTT FT INETCENLLIKKLINHYSRYSKQGLGLLIAEGLERSAFQSSVVTGFIGLSISLSGACIR FT KGDGTFLTLKESKNVVKPVAEVFPSLVMQSVCAVGDWVCGVESEMDKQMNKSIYMRTSL FT VNTAEFRFGLDELTAAIEMTMPDLFDKYLKDIVPPDKRLLMRHSWKVRPEMELLIECAN FT KGLSIFDGRIDRQEEAVVLVDYYEPGRLLRRTMKLEKRGPERTARKGLQAIVNRMILDS FT ILEPKIIDKTMVMDATKLAPYEGSMEDLKSHGESGVRRYIQQVLLGRESHYRQKEDEPN FT EITSSNVVVYGRGTPEFPLEDGTWLRGAKLGTSNPIKLQCCLQQISNDLKIQATLITHT FT GRAHYQDFMFLKRVIISDSDFDEPEILDTLEFRDVVVVENSKPNGKPCFLFMGCVIPLE FT SDLVGSIMTHMSEAEWEELWKLVRTYFITRMKGEISCLPKARFDALWGMVSRIFGYSTV FT EKVVTMGFHQLDSFAEFLTFTDRVFTTKGPTLVFHRLKGLLVSYPAGPLLYKGHRLMLY FT KDWASGTPEPETLED" XX SQ Sequence 6922 BP; 1944 A; 1529 C; 1220 G; 2229 T; 0 other; cgcactgggg atccgcgttt tccagtatcc atccgaagtt ctccattcaa tagtgaggaa 60 tctgacgact gccatctgaa cgtgtggaat caacggagcc acatctgact agtgcccagc 120 atgagcggct ccaccgccat tgggctgact acagaggtga tctccataat aacattcata 180 ctagtgattg ctatatttgt gattgagatt gttagctgtg ttacgatgat gactctgaaa 240 gcaatcacat tgaaaaaaag actcagcttt tgtcagggtt gtgggaaaaa tgctagtctt 300 gtcattctcc cctgcaaaaa caaggtctgc atggaatgtg ctctgaagat gagatgccca 360 gtttgctatg aagcatgcct ttggtgtgag aatcctgatg gatctctttc ctcactagca 420 ctcatcaaca aggaaagaaa caaagtcagg gacaacctcc ccgaaccata aaggctcaga 480 caaacaaccc accgaccaat ggacagagag acaacaaccg gaaaggagca agaaagagac 540 aacccagacc accggagacg gccctgccgt ctccggtggt ctggggggtc tcctgtgcct 600 ccgcccgttc ccgccgggac ctccgctgct cagtcctcca gggtctcggg ctcaggtgtc 660 ccagatgccc agtccttgta aagcatgagt ctgtgcccct tatatagcag tggtcctgct 720 gggtaactca caagcaaccc ttttaatcta tggaacacca gagtgggacc ttttgtagtg 780 aaaaccctat ctgtgaatgt tagaaattct gcaaaggagt caagttgatg aaaacccatg 840 gtaactacct tttcaactgt agaataacca aaaattctgc ttaccatccc ccacagagca 900 tcaaatctag cctttggaag acatgatatt tctcccttca ttcttgttat gaaatatgtc 960 ctcactaact tccaaagctc ctcccattca gcctctgaca tatgagtcat tattgatccc 1020 actaaatctg attccagagg aatcacacaa cccatgaata aaaaacatgg ttttccattt 1080 ggttttgagt tttccacaac cacaacatct ctaaactcca acgtgtctaa tatctcaggt 1140 tcatcaaaat ctgagtcaga aatgatcacc cttttaagaa acatgaagtc ttgatagtga 1200 gcacgtcctg tgtgtgtgat cagtgtcgcc tgaatcttga gatcattgct gatttgctga 1260 aggcagcact gcaactttat tggattagat gttcccaatt tggcacctct aagccatgtg 1320 ccatcttcta ggggaaactc tggggtgcct ctcccataca caaccacatt gctagatgtt 1380 atttcatttg gttcatcttc cttctgtcta taatgtgact ctctacccaa aaggacttgt 1440 tgaatatacc tcctaacacc agattctcca tgcgatttta ggtcttccat ggaaccttca 1500 tatggggcga gttttgttgc atccatgacc atagtcttat caataatttt tggctccaat 1560 attgaatcta agatcattct attaactatt gcttgcaagc cttttcttgc agtcctttca 1620 ggtcctctct tctcaagctt catggttcgt ctgagcaatc tacctggttc ataatagtcc 1680 accaacacga ctgcctcctc ctgcctatca attctaccat caaaaataga caatccttta 1740 ttggcacact ctatcaacaa ctccatttca ggtctaactt tccaagagtg tctcatgagc 1800 agccttttgt ctggtggtac aatatcttta agatacttat caaaaagatc aggcattgtc 1860 atttcaatgg ctgcagttaa ctcatctaac ccaaatctga attctgcagt gttgacaagt 1920 gatgttctca tataaatgct tttattcatc tgcttatcca tttcactttc aactccacaa 1980 acccaatcac caactgcaca gactgattgc atgaccaagg agggaaagac ttcagctact 2040 ggtttaacaa catttttgga ctcctttaag gtcaggaatg tgccatcacc cttcctaatg 2100 catgcaccag ataagctaat actcaatcca atgaaccctg tcaccactga gctttgaaaa 2160 gcagacctct cgagaccttc tgctatcagt aagccaagac cctgctttga atatctagag 2220 tagtggttga tcagtttttt gattaacaag ttctcacatg tctcatttat tgttgtgccc 2280 aaattgagtt tgcttctgac aattaatttg aattctccat tgagagttgg gaaccataaa 2340 gtgatttctc ctaattctga tttactgatg tctaccatct tattatatgc tacagatggt 2400 gctattgatg actctcttaa ctcttttatc accttaagta actcaagctt cagcacatca 2460 agtttcaatt ttccaattcc caaatccatc agccaactct ctaaagatct cagttttctg 2520 taagaaagac agccctccaa ccagtcttgt tgtcttgatt ctacaggctt catcaaagga 2580 tcagcaacat atcctaacca gcctaacatc tcaaccattc tcccttttag tgagtcagcc 2640 accttcagag acataccatt acaaatcccc tgttcaacaa tagcatcaca tgtgttgaaa 2700 agttccatcg gtgttttgca tctgaaattg ttgattgagg ctgcaaaaaa cttcgtgaat 2760 agaggaacca tggtggcctc aacttcaaaa tgtgatttga attctccaac aagtggacta 2820 cagcaaaatt tgggagaaat gtgtttgttc agacagttgg acaccaaaca cagaaagttc 2880 gtaatcaaaa gtagttcatc cttctgatta ctgtcctcat ttttatactt aatgtgaaac 2940 aataagacca tatcatcaga tgtgttcatg gtacttgacc taactccaaa aatttctttt 3000 atcttttttg ttatgtattc ggatgctaag gaaccgtaga gatctgatgt gtgatgtaag 3060 attccctggc ccatatcaaa ccaagagtgg atttgtgaag gcacgggttt gttggataga 3120 acagcatcca ccataaatgt ttcaaaagtt ctttctttcc caatttgtct gtctcttctc 3180 cccaagctta catcaagaga agaaaggatg acatcttcag ctaagatttg gggtgtctcc 3240 actgccttaa acaaatgcca ttttagaatg gtcttagcga atgagaaatc tagtcgtctc 3300 ccatctgtgt cattgatact ctccatcgcc tcaaacatta aatggtactg gagaggactg 3360 ttaaaggggc cccattttga gtgatccatg cttaaaacaa tctcattttc aaaaaaagac 3420 cttgcaattc ttttcatgaa gttggaaaac ttcttatctg aattaaggca gctattgtta 3480 agcctgttac caatgttcct tgaagtttct tccaaaactc tagttattag ttttgtatca 3540 gaatccccaa catatagttc tctgggtcca ccaacctgct cttttattgc aagtccaaat 3600 tggagtggct tgttgtttgg cccaatttca gaattcttca tctctaaatt tagtgtggaa 3660 aaaaggatat ttctcaatgt tggtgcacca tattttattg ctatgagtct atcctgtaat 3720 gcttctgaat ttgtaaccct tgttgaaagc atgctttctc ctctatattt attggagatt 3780 gacaagaatg aactttgggg gcctgatcta tgatcatatg ttccctgaaa attgttaaac 3840 cctgcccaaa gaagcaggaa cttaaaactt gagaaaaact ccttcaactc atattttgtg 3900 acaaccatac ctgctgatat attagtcaca tcaatggtgt caacattcct aggaaattct 3960 agtggggctc ttgacattgt ctcaccaaca attctttcat aagcctcctt tctgagcagg 4020 tctgtaggga gatctgacaa tttagtgctg taacacgtag aacgaacaag gtcacaaact 4080 tcaggaccta gcagttcacg aatcacatcc aaaaccaagc agtacttggt tttttgaaga 4140 tcatttatct cctttggatt cattttttta agctcatcat caatctcatg taagcattta 4200 ttgatttgta ggaggaagtc atttagatct tcttcagaat cagtttcaac aatgagtccc 4260 tgaacaattc ccaagaactc ctcataagcc aatctggttt tcttcctttt ttcaccgcca 4320 gctttccagt tcctttcctt cacagattca ccccctgatt taaagctctt ggctgtgctt 4380 ggatcatctc cagctttggt tgattttgtt attctcttgt gtagtctctc gcttatcact 4440 ctcttaagaa gcttctcagt gtcatattgc tggtctagta catcattcat gtggtggttc 4500 ttagatctct tgaacgtact cttatttgag gttagatcca agacatcaat gtttgaagtt 4560 aggtaatcct tcgggttaag taattgctca ccatcaatgc cattaaattt ttctgttgag 4620 atccacttta gaaaatcagc aagaataggt tcatatagaa aaggttttgt ctcaaaggaa 4680 ggttcctcac actgaataaa atcgttgacc tcctgttcca ttctctcaac cagctcatca 4740 acactcttac aatcataaat catattagac atgaactgaa actttggttt gaagaacttt 4800 tcataacagt ctcttaaatc tgacaacctg tctggggtct cctttgtgat caaatggcac 4860 aagtacgata tgttcaaggc ccatgtcact tttaagaaca gacctatatt tttacaagaa 4920 agaatttcat tgatcagtcc gtgggcaaga tctcttaaat aatattcatc ataagtaata 4980 cagtttccaa taactttggc tttcaagtcc ttgtggtgaa tgatagacaa agtatccata 5040 atgtagtatc tctgtgattg tagctctatc tgcagtcttt tggttggagt tgtcaaaata 5100 ccgtaaatca ggtatgtgac cttgacctta agatcatcaa tctgcttgtc agaatattca 5160 gatgaaatta agaattcatt cacagattcc tgtctcttaa ttgtttcctg cagcctttca 5220 gcatcttcac agattggatt aatcagcata attaattgat caactaagtt cgcaatgggc 5280 tttgcgctaa atatgagtgg gaaaagtctt gaagggttaa tattgaaaga atagaaactg 5340 tatctaagct caccctgctt gtagctttta caaagaatac taaatgcctt ctgtccttca 5400 cctgtgcact tgtacagtag gagacagcca ttaactgatt gaaagaaaaa ctcttcactc 5460 atgctggctc ttggtgtgct tcttgttttc tgggaaagaa tgagatttaa tgcaaccttt 5520 tcaatagtat ctgtctcatc ggatgttaca atggttgttt gtggctcata aggtacatca 5580 ttaatgattt ttagacataa tgatggctga ggtacaagga ctcttgctgg caacccaaaa 5640 tacatagtct tcaacactgg aggttcaatg aaattattag atgattcttc tagaaattta 5700 atgagaattt tcaattctcc caatttttgt ttgctgccta cttcattctg aaggctttgg 5760 agtgatttta tcattctctc aactaatttt ttgtacactg agagtggtga atctacagaa 5820 tccacccgca caagtctgtc attcacactt gggaaccaac cctttggaaa atcatgaatc 5880 tctgaatctc ttacaaagag catcaatgca atgtaatcat acaccttatt ctgcttcctt 5940 ctggtgttta atagatttag tgattttagt ttgttcagta gactcaagtg attggttcta 6000 aaatttaagc ctgttacagc acttctcatt atttctaaaa gccgcaactg cttgtcttcc 6060 cttttaaaat cttgtatcat ctctgttatt ttgggacctt cccagtttaa actgaaaggt 6120 aatttctcgc tgtttttcag catccagtca aagagatctt tatatgggtc ttctgctgac 6180 tcaatatcaa aaagtaacct ttgtccctta aattcctctg tcaaggttct aaaatcataa 6240 cttgttaatg acttcttgag ttccaaataa tcctcttctg agatccaatt gcaaatgtct 6300 gtagtgtaag atagaattga taatgatgtt gatagtaatt tgaacatgag gatttcagga 6360 atcctcccta ttctcggttt cttttctgaa attgtgataa cattaagtgt ccaaccaagt 6420 ggtcgcagca agttctcgaa accatcatac tttaatctgt caagttgaac cttcttagtt 6480 tgatcagatg gctcagtcct agtactcact tctaaaactg ttagaacgtt attatttttg 6540 tcaatcaagt aaccatcagg aacaattgtt ttgactgtct catgtgatcc aatggcctca 6600 tcgaacaatt cgttcatctc cttgagatca ttgttgtgtt tgagccctgt atctctgcag 6660 caattcaact catggatagt tgatctaagt ttaattgcgt tcatggccat ctctccagct 6720 gtatttgata tccatcctgg tctatacaaa tccctttcat aagacaacac ctctagcaca 6780 agacccttga gtctctctag ttcggagtcc tctggacata tggagctcat agttgcctgg 6840 ttgttgtcac ctcaccaccc ttgatgcatc aaataaactt ttcacatttg agagatctgg 6900 aaatacgcgg atcctcagtg cg 6922 //