ID JQ714137; SV 2; circular; genomic DNA; STD; VRL; 2564 BP. XX AC JQ714137; XX DT 29-MAY-2013 (Rel. 116, Created) DT 12-OCT-2014 (Rel. 122, Last updated, Version 4) XX DE Tomato mottle wrinkle virus isolate Ar:Pichanal:400 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mottle wrinkle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2564 RX PUBMED; 25252814. RA Vaghi Medina C.G., Martin D.P., Lopez Lambertini P.M.; RT "Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in RT Argentina"; RL Arch. Virol. 0:0(2014). XX RN [2] RP 1-2564 RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT ; RL Submitted (17-FEB-2012) to the INSDC. RL Instituto de Patologia Vegetal, INTA-CIAP, Camino 60 Cuadras Km 5 1/2, RL Cordoba X5020ICA, Argentina XX RN [3] RC Sequence update by submitter RP 1-2564 RA Vaghi Medina C.G., Lopez Lambertini P.M.; RT ; RL Submitted (29-JUL-2014) to the INSDC. RL Instituto de Patologia Vegetal, INTA-CIAP, Camino 60 Cuadras Km 5 1/2, RL Cordoba X5020ICA, Argentina XX DR MD5; b1230469214b09c74e81ffef62e75062. XX CC On Jul 29, 2014 this sequence version replaced gi:428621884. XX FH Key Location/Qualifiers FH FT source 1..2564 FT /organism="Tomato mottle wrinkle virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="Ar:Pichanal:400" FT /mol_type="genomic DNA" FT /country="Argentina" FT /collection_date="2008" FT /db_xref="taxon:1266458" FT gene 159..902 FT /gene="AV1" FT CDS 159..902 FT /codon_start=1 FT /gene="AV1" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:R4IQU5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:R4IQU5" FT /protein_id="AFZ40228.1" FT /translation="MPKRDAPWRIMAGTTKVSRSSNYSPRGGNSKRDAWVNRPMYRKPR FT IYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDITRGNGITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYM FT ACTHASNPVYATLKIRIYFYDSITN" FT gene complement(480..770) FT /gene="AC5" FT CDS complement(480..770) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /note="ac5" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:R4IQU6" FT /protein_id="AFZ40233.1" FT /translation="MVVDHMIIDLPETTNKSLLVACILSSRNLSIEPMHDLIPITKIVL FT HSGSTRLIIKHIKHLAKIHRCPIRSPIPNQPENDAVRVVLQFNIFVHPYLP" FT gene complement(899..1297) FT /gene="AC3" FT CDS complement(899..1297) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="replication enhancer protein" FT /db_xref="GOA:R4IQV8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R4IQV8" FT /protein_id="AFZ40230.1" FT /translation="MDSRTGEHITVHQAENGAFIWEIANPLYFKITNVEDHLYTTTRIY FT HLQIRFNHKLRKALDLHKAFLNFQVWTTSLRASGMTYLNRFKYLVLLYLDRLGVISINN FT VIRAVRFATDKSYVNYVLENHSIKFKLY" FT gene complement(1044..1433) FT /gene="AC2" FT CDS complement(1044..1433) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transactivator protein" FT /db_xref="GOA:R4IQV0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:R4IQV0" FT /protein_id="AFZ40231.1" FT /translation="MLNSSSSTPPSIKPRHRAAKQRAIRRKRIDLDCGCSIYIHLNCRN FT NGFTHRGTHHCASSREWRLYLGDCKSPLFQDNQRRGPPIHNDKDLSSADTFQPQTAESV FT GSPQGISKFPSLDDIPESFWDDIFK" FT gene complement(1354..2430) FT /gene="AC1" FT CDS complement(1354..2430) FT /codon_start=1 FT /gene="AC1" FT /product="Rep" FT /note="replication associated protein" FT /db_xref="GOA:R4IQU1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:R4IQU1" FT /protein_id="AFZ40229.2" FT /translation="MPLPKRFKISSKNYFITYPKCSLTKEDALSQLQALQTPTNKKFIK FT ICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAPSKESAMQIIREKLPEKYLFQYH FT NLNSNLDRIFNKPPEQWVPPFPLSSFTNVPDEMQEWADEYFGRGAAARPERPISIIIEG FT DSRTGKTRWARALGSHNYLSGHLHFNSKVYSNEVEYNVIDDVTPQYLKMKHWKELIGSQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPXEGASYKEFLDKHENSSLKAWTLHNAKFIFLN FT SPLYQTTTQSCQTEGNSA" FT gene complement(2016..2273) FT /gene="AC4" FT CDS complement(2016..2273) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /note="ac4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R4IQV4" FT /protein_id="AFZ40232.1" FT /translation="MGSLISTCLSNSKVNTNARIIDSSTWYPQQDQHISIRTFRELNHR FT PTSSPISIKTEILLNGENSKSTVEVLEEVSKRLTTPQQRH" XX SQ Sequence 2564 BP; 684 A; 485 C; 582 G; 812 T; 1 other; accggatggc cgcgcgattt tttaagtggt cccacaacgc ctgaccaatc agaattcgtc 60 ttgaaagtct atttattttg aaatacttgg gcgctaaggt tattaaagta atataaatag 120 gaccctactt atcatctctc aatacgcttt aattcaaaat gcctaagcgg gatgccccat 180 ggcgtataat ggcggggacc accaaagtta gtcgctcttc taattattca cctcgtggcg 240 gtaattccaa gcgagatgct tgggttaaca ggcccatgta taggaagccc aggatatatc 300 gtacgctgag agggccggat gttcctaaag gatgtgaagg cccatgtaaa gtccaatctt 360 atgagcagcg tcatgatatt tctcatcttg gcaaggtgat gtgtatttct gatatcacac 420 gtggtaatgg tattacacac cgtgtcggta agcgtttttg tgtcaagtcc gtgtacattt 480 tagggaagat atggatggac gaaaatatta aactgaagaa ccacacgaac agcgtcattt 540 tctggttggt tagggatcgg agaccgtatg ggacacctat ggattttggc caagtgttta 600 atatgtttga taatgagcct agtactgcca ctgtgaagaa cgatcttcgt gatcggtatc 660 aagtcatgca taggttcaat gctaaggtta cgggaggaca gtatgcaagc aacgagcaag 720 ctcttgttcg tcgtttctgg aaggtcaata atcatgtggt ctacaaccat caggaagcag 780 ggaaatatga gaatcacaca gagaacgctc tattattgta tatggcatgt actcatgctt 840 ctaatcccgt gtatgctact ttgaaaattc ggatctattt ttatgattcg attacaaatt 900 aataaagttt aaattttatt gaatgatttt cgagtacata atttacatat gatttgtctg 960 ttgcgaaacg aacagctctg attacattat taattgaaat aacacctaaa cggtctagat 1020 acaataagac taaatactta aatctattta aatatgtcat cccagaagct ctcagggatg 1080 tcgtccagac ttggaaattt agaaatgcct tgtggagatc caacgctttc cgcagtttgt 1140 ggttgaaacg tatctgcaga tgataaatcc ttgtcgttgt gtataggtgg tcctctacgt 1200 tggttatctt gaaatagagg ggatttgcaa tctcccaaat aaaggcgcca ttctctgctt 1260 gatgcacagt gatgtgttcc ccggtgcgtg aatccattgt ttctacagtt gaggtggatg 1320 tagatggagc agccacagtc taggtctatg cgtttacgcc gaattgccct ctgtttggca 1380 gctctgtgtc gtggtttgat agagggggga gttgaggaag atgaatttag cattatgaag 1440 tgtccacgct tttagagatg aattttcatg cttgtcaagg aactctttat aactagcccc 1500 ctctcstgga ttgcaaagca cgattgatgg gattcctcct ttaatttgaa ctggctttcc 1560 gtatttacag ttgctttgcc agtcacgttg ggacccaatt agctctttcc agtgtttcat 1620 ttttaggtat tgcggagtga catcatcaat gacgttatat tccacttcat ttgaataaac 1680 tttagaatta aagtgtagat gtccactcaa gtaattatgt gaacctaatg cacgggccca 1740 cctcgtcttc cccgtccttg aatcaccctc aatgattata ctaataggtc tctctggccg 1800 cgcagcggca ccccttccga aatattcatc agcccactct tgcatctcgt caggcacgtt 1860 agtgaaagat gagagtggaa acggaggaac ccattgttca ggaggcttat taaaaatcct 1920 atctaaattg gaatttaaat tatgatattg aaataaatat ttctcgggaa gtttttccct 1980 tattatttgc atagcggatt ctttagaagg ggcgtttaat gcctctgctg cggcgtcgtt 2040 agccgtttgc tgacctcctc tagcacttct accgtcgatt tggaattctc cccattcaag 2100 agtatctccg tctttatcga tataggactt gacgtcggac gatgatttag ctccctgaat 2160 gttcggatgg aaatgtgctg atcttgttgg ggataccagg tcgaagaatc tattattcgt 2220 gcattggtat ttaccttcga attggataag cacgtggaga tgaggctccc cattctcgtg 2280 aagttctcta cagatcttga tgaatttctt gttggttggt gtctgtaagg cttgtaattg 2340 ggaaagtgcg tcttctttag tgagagaaca tttaggatat gtgatgaaat agtttttgga 2400 agatatctta aaacgcttgg ggagtggcat atttgtaaat ataggcttgt accccgattg 2460 ctctcgcttc aaaactctat atgaattggg gtaatggggt acaatatata gtataagttc 2520 tttagggttt aaatagacac gtggcggcca tccgttataa tatt 2564 //