Dbfetch
ID JQ707944; SV 1; circular; genomic DNA; STD; VRL; 2844 BP. XX AC JQ707944; XX DT 28-MAY-2012 (Rel. 112, Created) DT 29-JAN-2013 (Rel. 115, Last updated, Version 3) XX DE Beet curly top Iran virus isolate IR:Neg:B25P:Sug:08, complete genome. XX KW . XX OS Beet curly top Iran virus OC Viruses; Geminiviridae; Becurtovirus. XX RN [1] RP 1-2844 RX DOI; 10.1007/s00705-012-1485-6. RX PUBMED; 23081676. RA Heydarnejad J., Keyvani N., Razavinejad S., Massumi H., Varsani A.; RT "Fulfilling Koch's postulates for beet curly top Iran virus and proposal RT for consideration of new genus in the family Geminiviridae"; RL Arch. Virol. 158(2):435-443(2013). XX RN [2] RP 1-2844 RA Heydarnejad J., Varsani A.; RT "Fulfilling the Koch's postulate for Beet curly top Iran virus, a unique RT geminivirus with a mastrevirus-like replication associated protein and RT curtovirus-like capsid protein"; RL Unpublished. XX RN [3] RP 1-2844 RA Heydarnejad J., Varsani A.; RT ; RL Submitted (25-FEB-2012) to the INSDC. RL Plant Protection, Shahid Bahonar University of Kerman, 22 Bahman Ave, RL Kerman 7616914111, Iran XX DR MD5; f5d3578698212d366dd1078a8a655490. XX FH Key Location/Qualifiers FH FT source 1..2844 FT /organism="Beet curly top Iran virus" FT /host="Beta vulgaris" FT /isolate="IR:Neg:B25P:Sug:08" FT /mol_type="genomic DNA" FT /country="Iran:Negar, Kerman" FT /collected_by="J. Heydarnejad" FT /collection_date="2008" FT /clone="B25P" FT /db_xref="taxon:391228" FT gene 165..434 FT /gene="V3" FT CDS 165..434 FT /codon_start=1 FT /gene="V3" FT /product="ss-ds DNA regulator" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/TrEMBL:I3QQ92" FT /protein_id="AFK14057.1" FT /translation="MMVCIPDWLFLLFVFSTILQSGINFYGTFQSERISAKLSSLASRF FT DELFLALQQVVFARNRASSSRAVDSRGRRGLSSIPEGSEEIAEA" FT gene 241..606 FT /gene="V2" FT CDS 241..606 FT /codon_start=1 FT /gene="V2" FT /product="movement protein" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/TrEMBL:I3QQ93" FT /protein_id="AFK14058.1" FT /translation="MVPFRVSEFPRSYPALLAVSTSCFLRYNKWCLLGIEPQVREPLTL FT EEGEDFLQFQKEVKKLLKLKVSFKRKCCLYEDIYKKYGGSESKEKVYSSGQLDEEEEDD FT RWEDSFEEIPMEETGSK" FT gene 485..1237 FT /gene="V1" FT CDS 485..1237 FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:I3QQ94" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:I3QQ94" FT /protein_id="AFK14059.1" FT /translation="MAVQSQKRKYTPPASWTRKRKTTGGRTVSKKYQWKRPVRSNRAVK FT LKMYDDMLGASGVGSTISNDGMITMLNNYVQGIGDSQRSNNLTVTRHLKFDMSLMASGA FT FWASPNYMTQYHWVIVDRDVGSTFPTQLSTIFDIPTGGQAMPSTYRIRRDANERFIVKK FT KWQTHLMSTGTDYGGKQIYKASSMPNYKKAMNINIRNINVKTLWKDTGGGKYEDVKENA FT ILYVVVNDNTDNTNMYATLFGNCRAYFY" FT gene complement(1483..1788) FT /gene="C2" FT CDS complement(1483..1788) FT /codon_start=1 FT /gene="C2" FT /product="hypothetical RepB" FT /db_xref="UniProtKB/TrEMBL:I3QQB5" FT /protein_id="AFK14060.1" FT /translation="MSGMVLDWSLYDIDHTTYHIIDDIRYQKIQQELFKSIIGCNEDYS FT VWIKHKPNLVIPGGRPCIAITNPDMDWIPCMSESMKDWFYANCDVYYLASDEVWYS" FT gene complement(1803..2711) FT /gene="C1" FT CDS complement(1803..2711) FT /codon_start=1 FT /gene="C1" FT /product="hypothetical RepA" FT /db_xref="GOA:I3QQ96" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I3QQ96" FT /protein_id="AFK14061.1" FT /translation="MPRAPNRNRPTPNQPGYLRFQKKNAFLTYSQIGGDFKDYIFEKLK FT TLLESYVILFLAVSLEHHQPTEEQPEGGFHTHCIIQCDKKLDVNGNLFFNIILPDGRTI FT HPRIDGLNAPKRAFEYITKEDTSPRTFGELRLGGRSPNNIGNSNVEWRRILDSSNTKEE FT FFSNIRESCPTDFVLRWPSILSFANYHFRPVVQPYTPRWTEFSRLPDTIKEWAEQNIYF FT VSSDCLHYEICENCRGAILQDRQMTLEEYFHLDRLSRDLTCSEDTNVLNLSRSQTTDQS FT DQEVSTYADHPEQERPSGQDL" XX SQ Sequence 2844 BP; 804 A; 487 C; 662 G; 891 T; 0 other; ccgcgtttac ctttccacgt ggcgtatgct gagtgggcgg acggttgagt ggggaacacg 60 ctttacttta aattaaagta aagtagcact aagtgggacc cactttttta tttctttaaa 120 gactttcttt ttaagtcttc tagatgcgta tattatacgt ataaatgatg gtctgtattc 180 ccgactggtt atttctactt ttcgtattta gtacgattct tcagtcggga attaatttct 240 atggtacctt tcagagtgag cgaatttccg cgaagctatc cagccttgct agccgtttcg 300 acgagctgtt tcttgcgtta caacaagtgg tgtttgctcg gaatcgagcc tcaagttcgc 360 gagccgttga ctctagagga aggcgaggac tttcttcaat tccagaagga agtgaagaaa 420 ttgctgaagc ttaaggttag ttttaagcgt aagtgttgtt tgtacgagga catatacaag 480 aagtatggcg gttcagagtc aaaagagaaa gtatactcct ccggccagtt ggacgaggaa 540 gaggaagacg accggtggga ggacagtttc gaagaaatac caatggaaga gaccggttcg 600 aagtaaccgg gctgtgaagt tgaagatgta tgacgacatg ttaggtgcat ctggagttgg 660 atctaccatc agtaatgatg ggatgatcac tatgttgaac aactatgttc aaggaattgg 720 tgatagccag aggtcaaaca acttgaccgt taccaggcat ttgaagtttg atatgtctct 780 tatggctagt ggtgcatttt gggcgagtcc taactatatg actcaatatc attgggttat 840 tgtggatcgt gatgttggtt ctacgtttcc gactcagttg agtactatct ttgatattcc 900 gactggtggt caggctatgc cttccactta tcggattagg agggatgcga atgaacgatt 960 tatcgtgaag aagaagtggc agactcattt gatgtctact ggtactgatt atggaggaaa 1020 gcagatctat aaggcgtctt caatgcctaa ttataagaaa gctatgaaca ttaatattcg 1080 gaatatcaat gtcaagacat tgtggaagga cactggaggt ggcaaatatg aagatgtgaa 1140 ggagaatgct attctttacg tagtggttaa tgataatact gataatacaa atatgtatgc 1200 tactttgttt ggtaattgta gggcttattt ctattgatta ttagaaatgc ccaatgatgt 1260 tgaagttgaa taaaaaattt attattaaat ttgtttgtgt aagattgaaa tgtagatatg 1320 taaatatcta gtataattgc cttggaaaac aaaaaacgaa aaaatgattg ccggaaaacg 1380 aaaaaaaaac ccctcagaaa ttagatcccc ggaaaatcaa tatatttata ttaatctgca 1440 gcccatccac gaagtggatg ttacatattt cgaagaaata gcttaactat accaaacttc 1500 atcacttgct aagtaatata catcgcaatt agcgtaaaac caatctttca tagattcact 1560 catacaaggt atccagtcca tatctggatt agtaatagca atacaaggtc ttccgcctgg 1620 aatgactaag tttggtttat gttttatcca aacactataa tcttcgttac atccgataat 1680 agatttaaac aactcctgtt gtattttttg atagcggata tcgtctatta tatggtatgt 1740 agtgtggtct atatcgtata gagaccaatc taataccatg ccagacatat agtggtgtcg 1800 gcctagagat cttgcccact gggtctttcc tgttctggat ggtccgcata tgtagagact 1860 tcttggtcgg actggtctgt tgtctggctc ctggacaaat taagtacgtt agtgtcttca 1920 ctacatgtta gatcgcgact aagtcgatct aggtggaagt attcttcaag agtcatttgt 1980 ctgtcttgaa gaattgctcc cctgcaattc tcacatattt cgtaatgtaa acaatctgaa 2040 cttacgaaat atatattttg ttccgcccac tctttgatag tgtcaggtag cctagagaac 2100 tccgtccatc tgggtgtgta aggttgcaca actggcctga aatgatagtt ggcgaaggat 2160 agaatggaag gccatctgag aacgaagtct gttgggcagg actctcgtat gttactgaag 2220 aactcctcct tggtgttgga tgaatcaaga attcgtctcc attccacgtt gctgttgcca 2280 atattgtttg gagagcgccc tcccagtcga agctctccaa atgttctagg gctcgtgtcc 2340 tccttggtga tatactcgaa tgctcgcttt ggggcgttga gtccgtcgat tcttgggtga 2400 atcgttcgac cgtctgggag tatgatgttg aaaaacaggt tcccatttac gtcgagtttc 2460 ttgtcacact ggataataca gtgtgtgtgg aatcctcctt caggttgttc ttcagtaggc 2520 tgatgatgtt ctagtgatac tgcaaggaat agaatcacat atgattctaa taaggtcttc 2580 agtttctcga atatataatc tttaaaatcc ccccctattt gggaatatgt tagaaaagca 2640 tttttctttt gaaaacgtaa ataaccgggt tggttagggg taggtctgtt tctgtttgga 2700 gcacgtggca tgtttgtttt tgtttccctc ttccgtacaa tgaatgaaaa gaaattgtat 2760 atatgagagg aagaggaact taagaggaat gaggaactga agagggaggt agagggataa 2820 ataggtaaac gcggataaga ttcc 2844 //