ID   JQ692579; SV 1; linear; genomic RNA; STD; VRL; 1928 BP.
XX
AC   JQ692579;
XX
DT   06-JUN-2013 (Rel. 117, Created)
DT   06-JUN-2013 (Rel. 117, Last updated, Version 1)
XX
DE   Southern rice black-streaked dwarf virus isolate VNM segment S8, complete
DE   sequence.
XX
KW   .
XX
OS   Southern rice black-streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1928
RA   Dinh T.-S., Zhou C., Cao X., Han C., Yu J., Li D., Zhang Y.;
RT   "The complete genome sequence of Southern rice black-streaked dwarf virus
RT   isolated from Vietnam";
RL   Plant Pathol. J. 28(4):428-432(2012).
XX
RN   [2]
RP   1-1928
RA   Dinh T.-S., Zhou C., Cao X., Han C., Yu J., Li D., Zhang Y.;
RT   ;
RL   Submitted (22-FEB-2012) to the INSDC.
RL   State Key Laboratory of Agro-Biotechnology, College of Biological Sciences,
RL   China Agricultural University, Yuanmingyuan West Road 2#, Haidian, Beijing
RL   100193, China
XX
DR   MD5; 89ad786c5ec26d0cd97f77cb507009f5.
XX
CC   GenBank Accession Numbers JQ692572-JQ692581 represent sequences
CC   from the 10 segments of Southern rice black-streaked dwarf virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1928
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="S8"
FT                   /host="rice"
FT                   /isolate="VNM"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Thua Thien Hue"
FT                   /collection_date="12-Aug-2011"
FT                   /db_xref="taxon:519497"
FT   CDS             25..1800
FT                   /codon_start=1
FT                   /product="P8 protein"
FT                   /function="core capsid protein"
FT                   /note="ORF8"
FT                   /db_xref="UniProtKB/TrEMBL:R9QRW0"
FT                   /protein_id="AFZ65530.1"
FT                   /translation="MIGTYDDRISLRLLFFNLWIKKRPNDPINHRKTKKKQKTMHEIAT
FT                   STDHLVSPSLSEYAEQLADEFAKTKHPIFTPSQLFSTFTRLETIFNRTGHFPDLFSTPI
FT                   KYLGFLIFMPDSSVLFDPPTPEHSYYNLKKNHKMSFSELETLLTAKALTGQIIKTEIND
FT                   FADSFETYYYDPRSERASFGFLRRTAMVRFDFLSYKYNNDLTVTEREKLPTWASNLITR
FT                   MNVVNTSLPYEINCGNINVNQHFAVIVLKNAKTNVTRARFWTVLDDERNFVSIKMDLQA
FT                   ITFERNDQTISGNLKHILNNCVALGEPFVFNALNYCFKITLLETGLSPLDDVVTIRMKD
FT                   LLRVFQEGQDIQVIGNKGVGKSEIGKRLSVLYPSLLVVDSDDYGKFLVLLLNLVPSMFK
FT                   NSEFEVDEIALTDDLYFQAMADFISLKQSENDNIDSIFEHIMEGLIEPNTLGNGDIQGE
FT                   AIMDSYNRIFHYIQGSKIVGYRRFITEYVRLMYTNFNKNQTCHFVHSYCELAFVPHSLA
FT                   YITLHSSYNSAVIGILPRNGQSVLSPTRAIANQMLHSFYERYTSNMNPTPAFLFSYFFG
FT                   LTKGINPLTAVSILC"
XX
SQ   Sequence 1928 BP; 597 A; 351 C; 337 G; 643 T; 0 other;
     aagttttttt cgcactgtct aaagatgatt ggcacctatg atgaccggat ttctttaaga        60
     ctattattct tcaacttatg gattaaaaaa cgacccaatg acccaatcaa ccaccgaaaa       120
     acgaagaaaa aacagaaaac gatgcatgaa atcgcaactt cgactgacca tttagtctct       180
     ccttcccttt ctgaatatgc ggaacaacta gcagatgagt ttgcgaaaac taaacatcct       240
     atctttacac cttctcaatt attttccact ttcacgcgtc tagaaacgat ctttaaccga       300
     acaggccatt ttcctgattt atttagcacg cctattaaat accttggatt cttgattttc       360
     atgcctgact cctcagttct cttcgaccca cccactccag aacattctta ttacaattta       420
     aaaaagaatc ataaaatgag cttcagtgaa ttggaaacat tgttaactgc gaaagcattg       480
     acaggtcaaa ttattaaaac tgaaataaat gattttgctg atagttttga aacttattat       540
     tacgatccca gaagtgagag agctagtttc ggctttttga gaagaacagc catggtgaga       600
     tttgatttct tatcctacaa atataacaat gatttgaccg taactgaacg tgaaaaatta       660
     ccaacttggg cttccaattt gatcactcgt atgaatgttg taaacacttc tcttccttac       720
     gaaattaact gtggaaatat taatgtaaat cagcattttg ctgtaatagt tttgaaaaat       780
     gctaagacga atgttactcg agctagattc tggaccgtat tggacgatga gcgcaacttt       840
     gtttcaataa aaatggatct tcaagctatc acctttgaac gtaacgatca gacaatatct       900
     ggtaatttga aacatatttt aaataattgt gtggctctag gcgagccttt tgtatttaac       960
     gctttaaatt attgttttaa aatcactttg ttagaaacgg gattgtctcc tttggatgat      1020
     gttgtcacta tcagaatgaa ggatttgtta cgtgtatttc aagaaggaca ggacattcaa      1080
     gttattggca acaaaggggt tggaaaatct gagattggaa aaaggttaag tgtgttatat      1140
     ccctctttgc ttgtagttga cagcgatgat tatggcaaat ttttggtatt attgctaaat      1200
     cttgttcctt ccatgtttaa aaacagtgaa tttgaagttg atgaaatcgc gcttactgat      1260
     gatttgtatt ttcaagcaat ggcagatttt atttctttaa aacaatcaga gaatgacaac      1320
     attgactcta tttttgagca tattatggag ggtttaattg aaccgaatac tttgggaaat      1380
     ggtgacattc aaggagaagc tattatggat agttacaatc gcatctttca ttatattcaa      1440
     ggatctaaaa tagtgggata tagaagattc atcaccgaat atgttcgttt gatgtatact      1500
     aattttaata aaaaccaaac ttgtcacttt gttcattctt actgtgaatt agcgttcgta      1560
     cctcattcgc tggcatatat tactcttcac agtagttata actccgcagt tatcggaatt      1620
     cttccacgaa atggtcaaag cgtattaagt cctactcgcg ccattgcgaa tcagatgtta      1680
     cacagcttct atgaacgcta tacatccaac atgaatccca ctcccgcttt tctcttctca      1740
     tatttctttg gtttaaccaa aggaatcaac cctttaacag ctgtgtctat tctttgctaa      1800
     attatacttt gaggaataat acgtcctttt tgggtccgac tcatataacg gtgtttcagt      1860
     ccaatatctt gatggcagac taggtcgatg tagattctag tgaagtgtgc gaaaattcag      1920
     ctgccgtc                                                               1928
//