ID   JQ679092; SV 1; linear; genomic DNA; STD; VRL; 1384 BP.
XX
AC   JQ679092;
XX
DT   04-JUN-2012 (Rel. 113, Created)
DT   04-JUN-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Cotton leaf curl Multan virus isolate GX1 precoat protein (V2), replication
DE   enhancer protein (C3), transcriptional activator protein (C2), and rep
DE   protein (C1) genes, complete cds.
XX
KW   .
XX
OS   Cotton leaf curl Multan virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1384
RA   Lai Y., Xie K., Liu Y.;
RT   "Novel recombinant DNA molecule of Cotton leaf curl Multan virus DNA-A and
RT   betasatellite";
RL   Unpublished.
XX
RN   [2]
RP   1-1384
RA   Lai Y., Xie K., Liu Y.;
RT   ;
RL   Submitted (16-FEB-2012) to the INSDC.
RL   School of Life Sciences, Tsinghua University, Haidian District, Beijing
RL   100084, China
XX
DR   MD5; ba322458c9eb7fda9ad13b115110b56c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1384
FT                   /organism="Cotton leaf curl Multan virus"
FT                   /host="Gossypium hirsutum L."
FT                   /isolate="GX1"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Nanning"
FT                   /collection_date="12-Aug-2011"
FT                   /PCR_primers="fwd_name: beta-f, fwd_seq:
FT                   gtaccgtatatgcctgtatatacg, rev_name: beta-r, rev_seq:
FT                   catgtataaagctttcaagccaacatc"
FT                   /db_xref="taxon:223252"
FT   gene            117..365
FT                   /gene="V2"
FT   CDS             117..365
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:I3VFE7"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:I3VFE7"
FT                   /protein_id="AFK78103.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYDLIRDL
FT                   ICILRSRNYVEASCRYRHFNARVESTSTGWGCIKVIK"
FT   gene            757..1101
FT                   /gene="C3"
FT   CDS             757..1101
FT                   /codon_start=1
FT                   /gene="C3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:I3VFE8"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:I3VFE8"
FT                   /protein_id="AFK78104.1"
FT                   /translation="METPIDNPLYFKIISHFNRPFTTNMDILTIRIQFNYNTRKALGLH
FT                   KCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVISINLVIKAVEHVLYNVIHGDEG
FT                   SHLRVTLCRL"
FT   gene            829..1101
FT                   /gene="C2"
FT   CDS             829..1101
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:I3VFE9"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:I3VFE9"
FT                   /protein_id="AFK78105.1"
FT                   /translation="MDILTIRIQFNYNTRKALGLHKCFLTFRIWTTLHPQTGLFLRVFK
FT                   TQVLKYLNNLGVISINLVIKAVEHVLYNVIHGDEGSHLRVTLCRL"
FT   gene            complement(1019..1318)
FT                   /gene="C1"
FT   CDS             complement(1019..1318)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="rep protein"
FT                   /db_xref="GOA:I3VFF0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="UniProtKB/TrEMBL:I3VFF0"
FT                   /protein_id="AFK78106.1"
FT                   /translation="MPFGDIINCLQSPIARVKSNQLSPIDQSQWLPPKRFKIQAKNYFL
FT                   TYPQCSLTKEEALSQIQAINTPSNKKYIKVCRELHEDGSPHLHGLHCTIHVLQL"
XX
SQ   Sequence 1384 BP; 438 A; 246 C; 302 G; 398 T; 0 other;
     accggatggc cgcgcgattt tttttgtggg ccccctattt atgagattgc tccctcaaag        60
     ctaaataacg ctcccgccca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt       120
     gggatccatt gttaaacgaa tttcctgata cggtgcacgg gtttcggtgt atgctttctg       180
     tcaaatattt gcaacttttg tcgcaggatt attcaccgga taccctaggt tacgatttaa       240
     tacgggattt aatttgtatt ctacgttccc gtaattatgt cgaagcgagc tgcagatatc       300
     gtcatttcaa cgcccgcgtc gaaagtacgt cgactggttg gggatgcatt aaagtgataa       360
     agtgatgatg gagatgtatt acatgtgttg ggagctcccg gatgttggct tgaaagcttt       420
     atacatgggt ttgtaccgta tatgcctgta tatacggata gaaaaaggat aagaaaagga       480
     aaaacggaac tgaagaggaa agacaaagaa aagaatcaag gatgtattat ttatgaaata       540
     aatgggagcg cagcgaatcg aaacaagaaa acccgaggaa agagaaaaaa taaaaagtga       600
     acagaaaaaa ataaaactcg aaaacgtcat cgtttgatag gaaggaaaaa aagagaaaac       660
     aataacatct ccgaaaacgt tgtcgtttga aggtgactgg gtggttttac catttactgt       720
     gtggtaaata gtaagttatt gaagaagagt taaaaaatgg agacaccgat agataatccc       780
     ctttatttca agataatcag ccacttcaac cgtccattca cgacgaatat ggacatactc       840
     acgatccgaa tccagttcaa ctacaacact cggaaagctc tcggactgca caagtgtttt       900
     ctaaccttcc gaatctggac gaccttacac cctcagactg gtcttttctt aagggtattc       960
     aaaacccaag tcctcaaata tctgaacaat ctcggtgtaa tttcaattaa tttagttatt      1020
     aaagctgtag aacatgtatt gtacaatgta atccatggag atgagggctc ccatcttcgt      1080
     gtaactctct gcagactttg atgtattttt tattcgaggg tgtgttgatg gcttgaattt      1140
     gggaaagtgc ttcctcttta gtgagtgagc actgtggata agtgaggaaa taatttttgg      1200
     cttgtatttt aaaacgtttg ggggggagcc attgactttg gtcaattgga gacaactgat      1260
     tggattttac tctggcaatt ggagactgga gacaatttat aatgtctcca aatggcatta      1320
     tcgtaatttg agaaaatcat ttcaaaatcc tcacgctcca aaaagcggcc atccgtataa      1380
     tatt                                                                   1384
//