ID   JQ675601; SV 5; linear; viral cRNA; STD; VRL; 940 BP.
XX
AC   JQ675601;
XX
DT   01-MAR-2013 (Rel. 116, Created)
DT   07-MAY-2014 (Rel. 120, Last updated, Version 4)
XX
DE   Jatobal virus nucleocapsid protein and nonstructural protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Jatobal virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Peribunyaviridae; Orthobunyavirus; Jatobal orthobunyavirus.
XX
RN   [1]
RP   1-940
RX   DOI; 10.1099/vir.0.061309-0.
RX   PUBMED; 24558222.
RA   Ladner J.T., Savji N., Lofts L., Travassos da Rosa A., Wiley M.R.,
RA   Gestole M.C., Rosen G.E., Guzman H., Vasconcelos P.F., Nunes M.R.,
RA   J Kochel T., Lipkin W.I., Tesh R.B., Palacios G.;
RT   "Genomic and phylogenetic characterization of viruses included in the
RT   Manzanilla and Oropouche species complexes of the genus Orthobunyavirus,
RT   family Bunyaviridae";
RL   J. Gen. Virol. 95(Pt 5):1055-1066(2014).
XX
RN   [2]
RP   1-940
RA   Palacios G., Savji N., Lipkin W.I.;
RT   ;
RL   Submitted (13-FEB-2012) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 722 W 168th Street
RL   17th Floor, New York, NY 10032, USA
XX
RN   [3]
RC   Sequence update by submitter
RP   1-940
RA   Ladner J.T., Savji N., Lofts L., Wiley M., Gestole M.C.,
RA   Travassos da Rosa A., Rosen G.E., Guzman H., Vasconcelos P.F.C.,
RA   Nunes M.R.T., Tesh R.B., Lipkin I., Palacios G.;
RT   ;
RL   Submitted (03-JAN-2014) to the INSDC.
RL   Center for Genomic Sciences, United States Army Medical Institute of
RL   Infectious Diseases, 1425 Porter Street, Frederick, MD 21702, USA
XX
RN   [4]
RC   Sequence update by submitter
RP   1-940
RA   Ladner J.T., Savji N., Lofts L., Wiley M., Gestole M.C.,
RA   Travassos da Rosa A., Rosen G.E., Guzman H., Vasconcelos P.F.C.,
RA   Nunes M.R.T., Tesh R.B., Lipkin I., Palacios G.;
RT   ;
RL   Submitted (01-MAY-2014) to the INSDC.
RL   Center for Genomic Sciences, United States Army Medical Institute of
RL   Infectious Diseases, 1425 Porter Street, Frederick, MD 21702, USA
XX
DR   MD5; f65c4184d6010639e3596a95e0fc1f38.
DR   EuropePMC; PMC5974287; 24558222.
XX
CC   On May 1, 2014 this sequence version replaced gi:625180286.
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Ray v. April 2013
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..940
FT                   /organism="Jatobal virus"
FT                   /segment="S"
FT                   /host="Nasua nasua"
FT                   /isolate="BeAn 423380"
FT                   /mol_type="viral cRNA"
FT                   /country="Brazil"
FT                   /collection_date="1984"
FT                   /db_xref="taxon:150058"
FT   CDS             45..740
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:M1F259"
FT                   /db_xref="InterPro:IPR001784"
FT                   /db_xref="UniProtKB/TrEMBL:M1F259"
FT                   /protein_id="AFI24666.1"
FT                   /translation="MSEFVFNDVPQRTTSTFDPEAAYVAFEAKYGQVLNAGVVRVFFLN
FT                   QKKAKDVLRKTSRPMVELTFGGVKFTMVNNHFPQFQANPVPDNGLTLHRLSGYLARWAF
FT                   TQMRSPLKQAEFRAAIVIPLAEVKGCTWNDGDAMYLGFAAGAEMFLQTFTFFPLVIEMH
FT                   RVLRDGMDVNFMKKVLRQRYGQKTAEQWMKEEIIAVRAAFEAVGTLAWARTGFSPAARE
FT                   FLRQFGIDL"
FT   CDS             64..342
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /db_xref="GOA:A0A023W1Q1"
FT                   /db_xref="InterPro:IPR000797"
FT                   /db_xref="UniProtKB/TrEMBL:A0A023W1Q1"
FT                   /protein_id="AHY23684.1"
FT                   /translation="MMYHKGLHLHLIRRQHMWHLKLNTDKCSMLVLLESSSSTKRRPRM
FT                   SYVRRRGPWLNLLLEGLNLQWLITISHNSRQIRCQTTVLPYTVCQDI"
XX
SQ   Sequence 940 BP; 310 A; 161 C; 201 G; 268 T; 0 other;
     agtagtgtac tccacaattc aaaacgtaaa ataaaacata caagatgtca gaattcgttt        60
     tcaatgatgt accacaaagg actacatcta catttgatcc ggaggcagca tatgtggcat       120
     ttgaagctaa atacggacaa gtgctcaatg ctggtgttgt tagagtcttc ttcctcaacc       180
     aaaagaaggc caaggatgtc ttacgtaaga cgtcgcggcc catggttgaa cttacttttg       240
     gaggggttaa atttacaatg gttaataacc atttcccaca attccaggca aatccggtgc       300
     cagacaacgg tcttacctta caccgtctgt caggatatct agctcgttgg gctttcaccc       360
     aaatgagatc tcctctgaaa caagcagagt ttagagctgc aattgtgatc cctttagccg       420
     aagttaaggg gtgcacttgg aatgatggtg atgccatgta cttgggattt gctgctggtg       480
     cagaaatgtt tctgcaaaca tttacatttt ttcctcttgt catagagatg catagagttt       540
     taagagatgg catggatgtt aacttcatga aaaaagtatt aagacaacgc tatggacaaa       600
     aaactgctga acaatggatg aaggaggaaa taattgctgt tagagcagca tttgaagcag       660
     ttggaactct agcttgggct agaacaggat tctctcctgc tgctagagaa ttcttgcgcc       720
     agtttggaat tgatctttaa agcttaatta ttgcataagt agtcaaatag ataataaata       780
     aaacaaaaaa tacaaaaaaa gtataaaata taaaaacaca aaaaaagtgc gaaagcacaa       840
     attagcactg cagtacttat tgagggttgg gaggttgggg aaactatata attactatgt       900
     cattttttta gatgtatttt tgaattggga gcacactact                             940
//