ID   JQ659258; SV 1; linear; viral cRNA; STD; VRL; 1090 BP.
XX
AC   JQ659258;
XX
DT   10-MAR-2013 (Rel. 116, Created)
DT   05-NOV-2013 (Rel. 118, Last updated, Version 4)
XX
DE   Herbert virus strain F23/CI/2004 segment S, complete sequence.
XX
KW   .
XX
OS   Herbert virus strain F23/CI/2004
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Peribunyaviridae; Herbevirus.
XX
RN   [1]
RP   1-1090
RX   DOI; 10.1128/JVI.01862-13.
RX   PUBMED; 24067954.
RA   Marklewitz M., Zirkel F., Rwego I.B., Heidemann H., Trippner P., Kurth A.,
RA   Kallies R., Briese T., Lipkin W.I., Drosten C., Gillespie T.R., Junglen S.;
RT   "Discovery of a unique novel clade of mosquito-associated bunyaviruses";
RL   J. Virol. 87(23):12850-12865(2013).
XX
RN   [2]
RP   1-1090
RA   Zirkel F., Junglen S.;
RT   ;
RL   Submitted (10-FEB-2012) to the INSDC.
RL   Institut of Virology, University of Bonn Medical Centre, Sigmund Freud-Str.
RL   25, Bonn, Nordrhein-Westfalen 53127, Germany
XX
DR   MD5; 47004f702e0994c96907bc470e65ee48.
DR   EuropePMC; PMC3838119; 24067954.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1090
FT                   /organism="Herbert virus strain F23/CI/2004"
FT                   /segment="S"
FT                   /host="Culex nebulosus"
FT                   /strain="F23/CI/2004"
FT                   /mol_type="viral cRNA"
FT                   /country="Cote d'Ivoire"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:1230253"
FT   CDS             103..783
FT                   /codon_start=1
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:U5F073"
FT                   /db_xref="InterPro:IPR001784"
FT                   /db_xref="UniProtKB/TrEMBL:U5F073"
FT                   /protein_id="AFR34025.1"
FT                   /translation="MATNFEFNDNITSSSFRGETFYASHENDVFLRDVNKVKDILAKGV
FT                   QLKRAIQALGEGENLVMKGYTVKAGIELTIYKGGPDLDDNVYTFSRLQGMCACIVFMNS
FT                   TKYPDLIVAIAKANGFKWESSYTGVQRSAYLSFTPGSHLFSHVFEYWPIACALYEIKKS
FT                   GKQSDVDLKVYQSRFRSRDETGPMLNKIDENTTLIKNTFSSIIGEGGIRSVAIKSLINK
FT                   IWPQ"
XX
SQ   Sequence 1090 BP; 374 A; 168 C; 199 G; 349 T; 0 other;
     agtagtgcac atccgtaaga gtcttttaac ttaaacgaca ctcgcaccag aaccgacaac        60
     ttgtacagat ccagtttaat taataaaaag cagattaaaa caatggctac caattttgaa       120
     ttcaatgata acatcacaag ctcaagtttt agaggggaga cattctatgc ttctcatgaa       180
     aacgatgtgt ttttgagaga tgtcaataag gtcaaagaca ttttggcaaa aggggtacaa       240
     ttgaagcgtg ctattcaagc tctgggagag ggtgaaaatc ttgtcatgaa gggttacaca       300
     gttaaagcag gaattgagtt gactatctat aaaggtggac ctgatctaga tgacaatgtt       360
     tatactttct caagacttca aggaatgtgt gcctgtattg ttttcatgaa ctctaccaaa       420
     tatcctgatc taattgttgc tattgctaaa gctaatggtt tcaaatggga atcatcttat       480
     acaggagttc aaagaagcgc ttatctttca ttcacaccag gctcacactt gtttagtcat       540
     gtttttgagt actggcctat tgcttgtgct ttatatgaga taaagaagag tggcaaacaa       600
     tcagacgtgg atttaaaagt gtatcagtct aggtttagat ctagagatga aacaggtcca       660
     atgctaaaca aaattgatga aaacactaca ctgattaaaa atacattttc ttcaatcatt       720
     ggtgagggtg gtattagatc tgttgctata aaatcactga tcaacaaaat atggcctcaa       780
     taaatagttt cacaaatttc tgggttagat taagcaattt atatcaattt acaatacttt       840
     agtataagct tttatatcaa tttataactt taatcaaaca tgtagtcgca caacattaat       900
     caattatttt aagttagttt gtatggggtt ggggaaatta tacttgacta ctgttatgaa       960
     ggcacatatc attaacttga gatcatagtt tggtaaattc agatcatatg gcttagaatt      1020
     ttcctaataa ttaataaact aacttgaaaa aacatgtaat agtgtatcgt tcaaacggat      1080
     gcacactact                                                             1090
//