ID   JQ629415; SV 1; linear; genomic RNA; STD; VRL; 669 BP.
XX
AC   JQ629415;
XX
DT   01-MAR-2013 (Rel. 116, Created)
DT   28-JUN-2013 (Rel. 117, Last updated, Version 2)
XX
DE   Strawberry necrotic shock virus isolate SNSV-GTO1 coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Strawberry necrotic shock virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-669
RX   DOI; .1094/PDIS-11-12-1103-PDN.
RX   PUBMED; 30722553.
RA   Silva-Rosales L., Vazquez-Sanchez M.N., Gallegos V.,
RA   Ortiz-Castellanos M.L., Rivera-Bustamante R., Davalos-Gonzalez P.A.,
RA   Jofre-Garfias A.E.;
RT   "First Report of Fragaria chiloensis cryptic virus, Fragaria chiloensis
RT   latent virus, Strawberry mild yellow edge virus, Strawberry necrotic shock
RT   virus, and Strawberry pallidosis associated virus in Single and Mixed
RT   Infections in Strawberry in Central Mexico";
RL   Plant Dis. 97(7):1002-1002(2013).
XX
RN   [2]
RP   1-669
RA   Jofre-Garfias A.E., Davalos-Gonzalez P.A., Silva-Rosales L.,
RA   Vazquez-Sanchez N.M., Gallegos V.;
RT   ;
RL   Submitted (08-FEB-2012) to the INSDC.
RL   Genetic Engineering, Cinvestav Unidad Irapuato, Km 9.6 Lib. Nte. Carr.
RL   Irapuato-Leon, Irapuato, Guanajuato 36821, Mexico
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DR   MD5; 2b47e835827f711876c303ee9f3599e3.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..669
FT                   /organism="Strawberry necrotic shock virus"
FT                   /host="Fragaria x ananassa Duch."
FT                   /isolate="SNSV-GTO1"
FT                   /mol_type="genomic RNA"
FT                   /country="Mexico:Irapuato, Guanajuato"
FT                   /collection_date="04-Jul-2008"
FT                   /db_xref="taxon:243563"
FT   CDS             1..669
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:M1FZM2"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:M1FZM2"
FT                   /protein_id="AFX69572.1"
FT                   /translation="MSVNRGKNVLNNNSNGCPTCFDKLDAAATNCARCMRNGGVSNRQR
FT                   RNARRAANFRNQRPVPVVPVSAPTTSKSLKLPGNQVWVTRKPSDWAAKTVDTNDAITLK
FT                   TIFNGIPEINDDTKIFRVLIGFVAVSDGTFGLVDGVVGDSIPDPPIIGRLGFKKNTYRS
FT                   RDFRFDGKLTPQVADKAIVWCLDSNRRDAKRVRLADFWIAISRPNPLMPPDEFLSGDSD
FT                   "
XX
SQ   Sequence 669 BP; 163 A; 146 C; 174 G; 186 T; 0 other;
     atgtctgtta acagggggaa gaatgttttg aacaacaact ccaatggttg cccaacttgt        60
     tttgacaagt tggatgccgc tgcaactaat tgcgcgagat gtatgcgcaa tggtggtgtt       120
     tctaaccgcc agcgcagaaa cgccaggagg gccgcgaatt ttcgcaatca gaggcccgtg       180
     cctgtagttc cagtttcggc tcccacgact tcaaaatctt tgaagttacc tgggaatcag       240
     gtgtgggtca ctcggaaacc gagtgattgg gccgctaaaa ctgttgatac caacgatgct       300
     atcacgttga agaccatttt taatggtatt cccgaaatca atgatgacac gaagattttc       360
     cgtgtcttaa ttggttttgt tgccgtgtcc gatgggacat ttggtttggt cgacggggtt       420
     gttggggatt caatccctga tcctccaatt attggaagat tgggatttaa aaagaatacc       480
     taccgtagcc gcgacttccg ttttgacgga aagctcactc cacaggttgc tgataaagca       540
     atcgtgtggt gcctcgactc taatcgtcga gatgccaaac gggttagact ggctgatttt       600
     tggatcgcca tatcacgacc taatccgttg atgcctccag atgagtttct gtcaggggac       660
     agcgattga                                                               669
//