ID   JQ619137; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619137;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Grapevine leafroll-associated virus 5 isolate TdB variant 24 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
XX
DR   MD5; ecf255a3602326475ea9c7cb4057679d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera cv Tinta da Bairrada"
FT                   /isolate="TdB variant 24"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P7M1"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P7M1"
FT                   /protein_id="AFD98074.1"
FT                   /translation="MSGALQNVAPTVQVTPQANETEAERKAREEKEKAELEEIQSLPVI
FT                   RGRTTVDTFEALINSSNGVLDLSKLEFPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAINKPSNSNKATHNLYEDTRVAPDIFLGNRR"
XX
SQ   Sequence 810 BP; 244 A; 180 C; 205 G; 181 T; 0 other;
     atgtctggag cattgcagaa cgttgctccg acagtgcagg taaccccaca agccaatgag        60
     acagaggctg agaggaaggc tagagaagag aaggagaaag ccgaattgga ggagatacaa       120
     tcccttcccg tgatacgagg taggacgacc gtagacactt tcgaagcatt aatcaacagc       180
     tcgaacggtg tactagactt gtccaaactg gagttcccta ggctctttaa cgttacaata       240
     cctggcgttg tgtcgggtaa acataaagtg attggggcga gagctctctg gaacttgggg       300
     aaatcaaaag ggatatctga gagtgataag catcaagtac aattcttgat gcaatccttt       360
     caggatttta taacacactc aacgtctcct aaggtgtcca gctcttccaa tcggacaata       420
     actggtaagt atgatggtaa ggaggtgaca gttgcccacg atgagataaa gacagctcta       480
     gacaactcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcattc       540
     acggcagcga tagtgcaagg gatatcctca ggcaaactgg aggtaaacac gaagatatgc       600
     gcttcccacg gtgtaccgcc taactactat ccttactcgc cggactgtct gcatgttgat       660
     gcaagattgt tcggttatga cgcttcactg gcagctgagt tgggcaagat ggttgctata       720
     aacaaaccct ccaacagcaa caaagccacg cacaatctgt acgaagacac tagggtggct       780
     ccggacatct tcctgggcaa caggagataa                                        810
//