ID   JQ619119; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619119;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Grapevine leafroll-associated virus 5 isolate MA4 variant 16 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
XX
DR   MD5; dda155ed78d29ea5c8bb4d99b9ffb7b1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera"
FT                   /isolate="MA4 variant 16"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P7U0"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P7U0"
FT                   /protein_id="AFD98056.1"
FT                   /translation="MSGVVQNVAPTVPGTPPAGETEAERKAREDKEKADLEEIQSLPVI
FT                   QGRTTVDTFEALINSSNGVLNLSRLELPRRFNVTIPGVVSDKHKVIGARALWNLGKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAIDKPSNSNRATHNLYEDTRVAPDIFLGNRR"
XX
SQ   Sequence 810 BP; 237 A; 179 C; 211 G; 183 T; 0 other;
     atgtctggag tagtgcagaa cgttgctccg acggtaccgg gaaccccacc agctggtgag        60
     acagaagctg agcggaaggc tagagaagat aaagagaagg ccgacttgga ggagatacaa       120
     tcccttcccg tgatacaagg taggacaacc gtggacactt tcgaagcatt aattaacagc       180
     tcgaatggtg tactaaactt gtctaggcta gagctcccca ggcggtttaa tgttacaata       240
     cccggcgttg tgtcggataa acataaagtg attggggcga gagctctctg gaacttgggg       300
     aaatcaaaag ggatatctga gagtgataag catcaggtac agttcttgat gcaatccttt       360
     caggatttca taacgcactc aacgtctcct aaggtatcca gctcttccaa tcggacgata       420
     actggtaagt atgatggtaa ggaagtgaca gttgcccatg atgagataaa gacagctcta       480
     gacaattcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcgttc       540
     acggcagcga tagtgcaagg gatatcctca ggcaaactag aggtgaacac aaagatatgc       600
     gcttctcacg gtgtaccgcc caactactat ccttactcgc cggactgtct gcacgttgat       660
     gcgagactat tcggttatga cgcttcactg gcagctgagt taggtaagat ggtggctatc       720
     gacaaacctt ccaacagcaa cagagctaca cacaatctgt acgaagacac cagggtggct       780
     ccggacatct tcctgggtaa caggaggtaa                                        810
//