ID   JQ619110; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619110;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Grapevine leafroll-associated virus 5 isolate L6 variant 4 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
XX
DR   MD5; c9058a7d05a1b33f627ba073957675da.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera"
FT                   /isolate="L6 variant 4"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P4S1"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P4S1"
FT                   /protein_id="AFD98047.1"
FT                   /translation="MSGVTQNVVPTVSETPPASETEAERKAREDKEKADLEEIQSLPEI
FT                   QGRTTVDTFEALINSSDGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAINKPSNSNTATHNLYEDTRVARDIFLGNRR"
XX
SQ   Sequence 810 BP; 239 A; 179 C; 208 G; 184 T; 0 other;
     atgtctggag taacgcagaa cgttgttccg acagtatcgg aaaccccacc agctagtgag        60
     acagaggctg agcggaaggc tagagaagat aaggagaagg ccgacttgga ggagatacaa       120
     tcccttcccg agatacaagg taggacaacc gtggacactt tcgaagcact aatcaacagc       180
     tcggatggtg tactagacct atctaggctg gagctcccta gactgtttaa cgttacaata       240
     cctggcgttg tgtcgggtaa acataaggtg attggggcga gagctctctg gaacttgggg       300
     aaatcaaaag ggatatctga gagtgataag catcaggtac agttcttgat gcaatccttt       360
     caggatttca taacgcactc aacgtctcct aaggtatcca gctcttccaa tcggacgata       420
     actggtaagt atgatggtaa ggaagtgaca gttgcccatg atgagataaa gacagctcta       480
     gacaattcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcattc       540
     acggcagcga tagtgcaggg gatatcctca ggcaaactag aggtgaacac aaagatatgt       600
     gcttctcacg gtgtaccacc caactactat ccttactcgc cggactgtct gcacgttgat       660
     gcgagactat tcggttatga cgcttcactg gcagctgagt taggtaagat ggtcgctatc       720
     aataaacctt ccaacagcaa cacagctaca cacaatctgt acgaagacac cagggtggct       780
     cgggacatct tcctgggtaa caggaggtaa                                        810
//