ID   JQ619101; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619101;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
XX
DE   Grapevine leafroll-associated virus 5 isolate L5 variant 7 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
XX
DR   MD5; f8f7699a35302f1d0c120e8dca33fb59.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera"
FT                   /isolate="L5 variant 7"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P7R8"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P7R8"
FT                   /protein_id="AFD98038.1"
FT                   /translation="MSGVTQNVVPTVSETPPASETEAERKAREDKEKADLEEMQSLPVI
FT                   QGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLRKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAINKPSNSNRATHNLYEDTKVAPDIFXGNRR"
XX
SQ   Sequence 810 BP; 238 A; 176 C; 208 G; 187 T; 1 other;
     atgtctggag taacgcagaa cgttgttccg acagtatcgg aaaccccacc agctagtgag        60
     acagaggctg agcggaaggc tagagaagat aaggagaagg ccgacttgga ggagatgcaa       120
     tcccttcccg tgatacaagg taggacaacc gtggacactt tcgaagcact aatcaacagc       180
     tcgaatggtg tactagacct atctaggctg gagctcccta gattgtttaa cgttacaata       240
     cctggcgttg tgtcgggtaa acataaggtg attggggcga gagctctctg gaacttgagg       300
     aaatcaaaag ggatatctga gagtgataag catcaggtac agttcttgat gcaatccttt       360
     caggatttta taacgcactc aacgtctcct aaggtatcca gctcttccaa tcggacgata       420
     actggtaagt atgatggtaa ggaagtgacg gttgcccatg atgagataaa gacagctcta       480
     gacaattcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcattc       540
     acggcagcga tagtgcaggg gatatcctca ggcaaactag aggtgaacac aaagatatgt       600
     gcttctcacg gtgtaccgcc caactactat ccttactcgc cggactgtct gcacgttgat       660
     gcgagactat tcggttatga cgcttcactg gcagctgagt taggtaagat ggtcgctatc       720
     aataaacctt ccaacagcaa cagagctaca cacaatctgt acgaagacac caaggtggct       780
     ccggacatct tcntgggtaa caggaggtaa                                        810
//