ID   JQ619089; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619089;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 5 isolate ML5 variant 42 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
XX
RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
XX
DR   MD5; 28c58d44e11b46e837aab5a38f4025a7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera"
FT                   /isolate="ML5 variant 42"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P7T4"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P7T4"
FT                   /protein_id="AFD98026.1"
FT                   /translation="MSGTVQNVAPTVSETPPTSETEAERKAREAKEKADLEEIQSLPVI
FT                   QGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEMKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAINKPSNSNRATHNLYEDTRVAPDFFLGNRR"
XX
SQ   Sequence 810 BP; 234 A; 184 C; 209 G; 183 T; 0 other;
     atgtctggaa cagtgcagaa cgttgctccg acagtatcgg aaaccccacc aactagtgag        60
     acggaggctg agcggaaagc tagagaagct aaggaaaagg ccgacttgga ggagatacaa       120
     tcccttcccg tgatacaagg taggacaacc gtggacactt tcgaagcgct aatcaatagc       180
     tcgaatggtg tactagactt gtctaggctg gagctcccta ggctgtttaa cgttacaata       240
     cctggcgttg tgtcgggtaa acataaagtg atcggggcga gagccctctg gaacttgggg       300
     aaatcaaaag ggatatctga gagtgataag catcaagtac agttcttgat gcaatccttt       360
     caggatttca taacgcactc aacgtctccc aaggtgtcca gctcttccaa tcggacgata       420
     actggtaagt atgatggtaa ggaagtgaca gttgcccacg atgagatgaa gacagctcta       480
     gacaattcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcattc       540
     acggcagcga tagtgcaagg gatatcctca ggcaagttgg aggtgaacac aaagatatgc       600
     gcctctcacg gtgtaccgcc taactactat ccttactcgc cggactgtct gcacgttgat       660
     gcacgactat tcggttatga cgcttcactg gcagctgagt taggtaagat ggttgctatc       720
     aacaaacctt ccaacagcaa cagagctaca cacaatctgt acgaagacac cagggtggct       780
     ccggacttct tcctgggtaa caggagatga                                        810
//