ID   JQ619086; SV 1; linear; genomic RNA; STD; VRL; 810 BP.
XX
AC   JQ619086;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 2)
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DE   Grapevine leafroll-associated virus 5 isolate CG6 variant 2 capsid protein
DE   (CP) gene, complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 5
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus.
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RN   [1]
RP   1-810
RX   PUBMED; 22692680.
RA   Esteves F., Teixeira Santos M., Eiras-Dias J.E., Fonseca F.;
RT   "Occurrence of grapevine leafroll-associated virus 5 in Portugal: genetic
RT   variability and population structure in field-grown grapevines";
RL   Arch. Virol. 157(9):1747-1765(2012).
XX
RN   [2]
RP   1-810
RA   Esteves F., Fonseca F.;
RT   ;
RL   Submitted (03-FEB-2012) to the INSDC.
RL   Universidade do Algarve, Campus de Gambelas 8005-139 Faro, Portugal
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DR   MD5; 4e100cf65bca07c46ed3260e93b5655c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..810
FT                   /organism="Grapevine leafroll-associated virus 5"
FT                   /host="Vitis vinifera"
FT                   /isolate="CG6 variant 2"
FT                   /mol_type="genomic RNA"
FT                   /country="Portugal"
FT                   /db_xref="taxon:71032"
FT   gene            1..810
FT                   /gene="CP"
FT   CDS             1..810
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:I6P7R5"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:I6P7R5"
FT                   /protein_id="AFD98023.1"
FT                   /translation="MSGTVQDVAPTVPTTPPTSETEAERKAREAKEKADLEEIQSLPVI
FT                   QGRTTVDTFEALINSSNGVLDLSRLEFPRLFNVTIPGVVSGKHKVIGARALWNLGKSKG
FT                   ISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTALDNS
FT                   IGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDAR
FT                   LFGYDASLAAELGKMVAINKPSNSNKATHNLYEDTRVAPDIFLGNRR"
XX
SQ   Sequence 810 BP; 237 A; 185 C; 205 G; 183 T; 0 other;
     atgtctggaa cagtgcagga cgttgctccg acggtaccga caaccccacc cactagtgag        60
     acggaggctg agcgaaaagc tagagaagct aaggagaagg ccgacttaga ggagatacaa       120
     tcccttcccg tgatacaagg taggacaact gtggacactt tcgaagcact aatcaatagc       180
     tcgaatggtg tactagactt gtctaggctg gagttcccta ggctgtttaa cgttacaata       240
     cctggcgttg tgtcgggtaa acataaagtg atcggggcga gagctctctg gaacttgggg       300
     aaatcgaaag ggatatctga gagtgacaag catcaagtac agttcttgat gcaatccttt       360
     caggatttca taacgcactc aacgtctccc aaggtgtcca gctcttccaa tcggacaata       420
     actggtaagt atgatggtaa ggaagtgaca gttgcccacg acgagataaa gacagctcta       480
     gacaattcta tagggtcttt cggttacgaa aacactccta gacaatttgg aagagcattc       540
     acggcagcga tagtgcaagg gatatcctca ggcaagctag aggtgaacac aaagatatgc       600
     gcctctcacg gtgtaccgcc taactactat ccttactcgc cggactgtct gcatgttgat       660
     gcacgactat tcggttatga cgcttcactg gcagctgagt taggtaagat ggttgctatc       720
     aacaaacctt ccaacagcaa caaagctaca cataatctgt acgaagacac cagggtggct       780
     ccggacatct tcctgggtaa caggagatga                                        810
//