ID   JQ612526; SV 1; linear; genomic RNA; STD; VRL; 1816 BP.
XX
AC   JQ612526;
XX
DT   26-MAR-2012 (Rel. 112, Created)
DT   26-MAR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Am movement protein and coat protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-1816
RA   Niu Y.B., Shi X.L.;
RT   "Characteristics of Cucumber mosaic virus isolated from Atractylodes
RT   macrocephala Koidz";
RL   Unpublished.
XX
RN   [2]
RP   1-1816
RA   Niu Y.B., Shi X.L.;
RT   ;
RL   Submitted (02-FEB-2012) to the INSDC.
RL   Shanxi Agricultural University, College of Life Science, Taigu, Jinzhong,
RL   Shanxi 030801, China
XX
DR   MD5; 71732c3be052421614299890677e2c17.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1816
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Atractylodes macrocephala"
FT                   /isolate="Am"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="01-May-2011"
FT                   /db_xref="taxon:12305"
FT   CDS             25..864
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:H9DRN1"
FT                   /protein_id="AFE82853.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSEYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHSYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFESFRPQVVNGL"
FT   CDS             1160..1816
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H9CTH2"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:H9CTH2"
FT                   /protein_id="AFE82854.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTLNHPTFVGSERCKPGYTFSSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAVFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 1816 BP; 425 A; 434 C; 431 G; 526 T; 0 other;
     tcagtgtgtt agatttcccg aggcatggct ttccaaggta ccagcaggac tttaacccaa        60
     cagtcctcag cggcgacgtc tgacgaactt caaaagatat tatttagccc tgatgccatt       120
     aagaaaatgg ctgctgagtg tgacctaggc cggcatcatt ggatgcgcgc tgataatgca       180
     atttcagtcc ggcccctcgt tcccgaagta acccacggtc gtattgcttc cttctttaag       240
     tctgaatatg atgctggtga attatgttct aaaggataca tgagcgtccc tcaagtgttg       300
     tgtgctgtta ctcgaacagt ttccaccgat gctgaagggt ccttgagaat ttacctagct       360
     gatttaggtg ataaggagct atctcccata gataagcagt gcgtcacatt acataaccat       420
     gatcttcccg ctttagtgtc tttccaaccg acgtatgatt gtcctatgga gacagttggg       480
     aatcggaagc ggtgttttgc tgttgttatc gaaagacata gttatattgg gtataccggc       540
     accacagcta gcgtgtgtag taattggcaa gcacggtttt cttctaagaa taacaactac       600
     actcatatcg cagctgggaa gactctagta ctgccattca acagattagc tgagcaaacg       660
     aaaccgtcag ccgtcgctcg cctgttgaag tcgcaactga ataatataga atcttcgcaa       720
     tacgtcttga cggattcgaa gatcaatcag aatgcgcgca gtgagtccga ggaattaaat       780
     gttgagagcc ctcccgccgc aatcgggagt tcttccgcgt cccgcttcga atccttcaga       840
     ccgcaggtgg tcaacggtct ttagcgcttt cgttgcgtat tagtatataa gtatatgtga       900
     gtctgtacat aatactatat ctatagtgtc ctgtgtgggt tgatacagta gacaactgtg       960
     acgcgacgtc gtgttgagaa gggaacacat ctggttcttg taagccacac cattagtttt      1020
     gaggttcaat tcctcttgct ccctgttgtg ccccttactt tttcatggat gcttctccac      1080
     gaaattgcgt ttcgtctact ggatcttaga gagtctgtgt tgtgttttct ctttgtgtcg      1140
     tagatatttg agtcgagtca tggacaaatc tgaatcaacc agtgctggtc gtaaccgtcg      1200
     acgtcgtccg cgtcgtggtt cccgctccgc ttcctcctcc gcggatgcca actttagagt      1260
     cctgtcgcag caactttcgc gacttaataa gacgttggca gctggtcgtc ctacccttaa      1320
     ccacccaacc tttgtgggga gtgaacgttg taaacctggg tacacgttct catctattac      1380
     cctgaagcca ccgaaaatag accgcgggtc ttattatggt aaaaggttgt tactacctga      1440
     ttcagtcacg gaattcgata agaagcttgt ttcgcgcatt caaattcgag ttaatccttt      1500
     gccgaaattt gattctaccg tgtgggtgac ggtccgtaaa gttcctgcct cctcggacct      1560
     gtccgtcgcc gccatctctg ctgtgtttgc ggacggagcc tcaccggtac tggtttatca      1620
     gtatgctgca tccggagtcc aagccaacaa taaattgttg tatgatcttt cggcgatgcg      1680
     cgctgatatt ggcgacatgc gaaagtacgc cgttctcgtg tattcaaaag acgatgctct      1740
     cgagacggat gagttagtac ttcatgttga catcgagcac caacgcattc ccacatctgg      1800
     ggtgctacca gtctga                                                      1816
//